Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SDF4Q9BRK5 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
SDF4Q9BRK5 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.08■□□□□ 0.97
SDF4Q9BRK5 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SDF4Q9BRK5 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SDF4Q9BRK5 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SDF4Q9BRK5 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.08■□□□□ 0.97
SDF4Q9BRK5 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SDF4Q9BRK5 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SDF4Q9BRK5 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.08■□□□□ 0.97
SDF4Q9BRK5 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SDF4Q9BRK5 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SDF4Q9BRK5 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.08■□□□□ 0.97
SDF4Q9BRK5 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.08■□□□□ 0.97
SDF4Q9BRK5 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SDF4Q9BRK5 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SDF4Q9BRK5 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
SDF4Q9BRK5 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SDF4Q9BRK5 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.08■□□□□ 0.96
SDF4Q9BRK5 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
SDF4Q9BRK5 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SDF4Q9BRK5 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.08■□□□□ 0.96
SDF4Q9BRK5 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
SDF4Q9BRK5 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SDF4Q9BRK5 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.07■□□□□ 0.96
SDF4Q9BRK5 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SDF4Q9BRK5 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SDF4Q9BRK5 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.07■□□□□ 0.96
SDF4Q9BRK5 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.07■□□□□ 0.96
SDF4Q9BRK5 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.07■□□□□ 0.96
SDF4Q9BRK5 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
SDF4Q9BRK5 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SDF4Q9BRK5 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.07■□□□□ 0.96
SDF4Q9BRK5 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.07■□□□□ 0.96
SDF4Q9BRK5 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.07■□□□□ 0.96
SDF4Q9BRK5 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC21.07■□□□□ 0.96
SDF4Q9BRK5 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SDF4Q9BRK5 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SDF4Q9BRK5 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SDF4Q9BRK5 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SDF4Q9BRK5 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SDF4Q9BRK5 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SDF4Q9BRK5 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SDF4Q9BRK5 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SDF4Q9BRK5 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SDF4Q9BRK5 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SDF4Q9BRK5 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC21.06■□□□□ 0.96
SDF4Q9BRK5 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SDF4Q9BRK5 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SDF4Q9BRK5 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SDF4Q9BRK5 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SDF4Q9BRK5 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SDF4Q9BRK5 MIR564-202ENST00000385049 94 ntBASIC21.06■□□□□ 0.96
SDF4Q9BRK5 SPDYE15P-201ENST00000424157 909 ntBASIC21.06■□□□□ 0.96
SDF4Q9BRK5 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.06■□□□□ 0.96
SDF4Q9BRK5 AC112907.2-201ENST00000448639 330 ntBASIC21.06■□□□□ 0.96
SDF4Q9BRK5 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.06■□□□□ 0.96
SDF4Q9BRK5 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.06■□□□□ 0.96
SDF4Q9BRK5 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.06■□□□□ 0.96
SDF4Q9BRK5 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SDF4Q9BRK5 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SDF4Q9BRK5 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.06■□□□□ 0.96
SDF4Q9BRK5 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC21.06■□□□□ 0.96
SDF4Q9BRK5 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SDF4Q9BRK5 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SDF4Q9BRK5 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SDF4Q9BRK5 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SDF4Q9BRK5 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SDF4Q9BRK5 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.05■□□□□ 0.96
SDF4Q9BRK5 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SDF4Q9BRK5 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SDF4Q9BRK5 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.05■□□□□ 0.96
SDF4Q9BRK5 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SDF4Q9BRK5 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SDF4Q9BRK5 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SDF4Q9BRK5 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SDF4Q9BRK5 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC21.05■□□□□ 0.96
SDF4Q9BRK5 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SDF4Q9BRK5 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.05■□□□□ 0.96
SDF4Q9BRK5 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SDF4Q9BRK5 KRT18P23-201ENST00000435622 1283 ntBASIC21.05■□□□□ 0.96
SDF4Q9BRK5 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.05■□□□□ 0.96
SDF4Q9BRK5 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.05■□□□□ 0.96
SDF4Q9BRK5 AL121956.5-201ENST00000625261 221 ntBASIC21.05■□□□□ 0.96
SDF4Q9BRK5 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SDF4Q9BRK5 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.05■□□□□ 0.96
SDF4Q9BRK5 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SDF4Q9BRK5 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SDF4Q9BRK5 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SDF4Q9BRK5 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SDF4Q9BRK5 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SDF4Q9BRK5 LTB4R2-202ENST00000528054 3092 ntBASIC21.05■□□□□ 0.96
SDF4Q9BRK5 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SDF4Q9BRK5 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SDF4Q9BRK5 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SDF4Q9BRK5 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SDF4Q9BRK5 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.04■□□□□ 0.96
SDF4Q9BRK5 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SDF4Q9BRK5 FZD10-202ENST00000539839 3282 ntBASIC21.04■□□□□ 0.96
SDF4Q9BRK5 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms