Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC6Q99741 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CDC6Q99741 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.46■□□□□ 0.39
CDC6Q99741 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC6Q99741 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.46■□□□□ 0.39
CDC6Q99741 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC6Q99741 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC6Q99741 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CDC6Q99741 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.46■□□□□ 0.39
CDC6Q99741 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.46■□□□□ 0.39
CDC6Q99741 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.46■□□□□ 0.39
CDC6Q99741 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.46■□□□□ 0.39
CDC6Q99741 UNC93B6-202ENST00000528242 690 ntBASIC17.46■□□□□ 0.39
CDC6Q99741 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.46■□□□□ 0.39
CDC6Q99741 MTDHP5-201ENST00000598980 586 ntBASIC17.46■□□□□ 0.39
CDC6Q99741 AC134684.3-201ENST00000641758 218 ntBASIC17.46■□□□□ 0.39
CDC6Q99741 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC6Q99741 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.46■□□□□ 0.39
CDC6Q99741 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.46■□□□□ 0.39
CDC6Q99741 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDC6Q99741 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDC6Q99741 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.46■□□□□ 0.39
CDC6Q99741 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.46■□□□□ 0.39
CDC6Q99741 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CDC6Q99741 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.46■□□□□ 0.39
CDC6Q99741 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CDC6Q99741 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.46■□□□□ 0.38
CDC6Q99741 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CDC6Q99741 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDC6Q99741 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC6Q99741 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC6Q99741 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.45■□□□□ 0.38
CDC6Q99741 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC6Q99741 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.45■□□□□ 0.38
CDC6Q99741 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC6Q99741 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CDC6Q99741 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CDC6Q99741 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC6Q99741 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC6Q99741 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.45■□□□□ 0.38
CDC6Q99741 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDC6Q99741 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDC6Q99741 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.45■□□□□ 0.38
CDC6Q99741 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.45■□□□□ 0.38
CDC6Q99741 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC6Q99741 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC6Q99741 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CDC6Q99741 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC6Q99741 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC6Q99741 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC6Q99741 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.45■□□□□ 0.38
CDC6Q99741 LAGE3P1-201ENST00000425356 484 ntBASIC17.45■□□□□ 0.38
CDC6Q99741 KRT18P65-201ENST00000439811 1286 ntBASIC17.45■□□□□ 0.38
CDC6Q99741 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.45■□□□□ 0.38
CDC6Q99741 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.45■□□□□ 0.38
CDC6Q99741 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.45■□□□□ 0.38
CDC6Q99741 NKAPP1-205ENST00000585790 367 ntBASIC17.45■□□□□ 0.38
CDC6Q99741 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.45■□□□□ 0.38
CDC6Q99741 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDC6Q99741 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDC6Q99741 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
CDC6Q99741 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDC6Q99741 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CDC6Q99741 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.45■□□□□ 0.38
CDC6Q99741 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.45■□□□□ 0.38
CDC6Q99741 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC6Q99741 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDC6Q99741 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDC6Q99741 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.45■□□□□ 0.38
CDC6Q99741 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDC6Q99741 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC6Q99741 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDC6Q99741 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CDC6Q99741 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC6Q99741 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.44■□□□□ 0.38
CDC6Q99741 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC6Q99741 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CDC6Q99741 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC6Q99741 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC6Q99741 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.44■□□□□ 0.38
CDC6Q99741 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.44■□□□□ 0.38
CDC6Q99741 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC6Q99741 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC6Q99741 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDC6Q99741 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDC6Q99741 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC6Q99741 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC6Q99741 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CDC6Q99741 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CDC6Q99741 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDC6Q99741 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDC6Q99741 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDC6Q99741 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.44■□□□□ 0.38
CDC6Q99741 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDC6Q99741 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.44■□□□□ 0.38
CDC6Q99741 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC6Q99741 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.44■□□□□ 0.38
CDC6Q99741 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.44■□□□□ 0.38
CDC6Q99741 LINC02084-201ENST00000606069 1096 ntBASIC17.44■□□□□ 0.38
CDC6Q99741 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms