Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PKP4Q99569 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PKP4Q99569 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PKP4Q99569 KRT89P-201ENST00000620027 1478 ntBASIC17.65■□□□□ 0.42
PKP4Q99569 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PKP4Q99569 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PKP4Q99569 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PKP4Q99569 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PKP4Q99569 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.65■□□□□ 0.42
PKP4Q99569 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.65■□□□□ 0.42
PKP4Q99569 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.65■□□□□ 0.42
PKP4Q99569 ZNF444P1-201ENST00000559497 298 ntBASIC17.65■□□□□ 0.42
PKP4Q99569 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PKP4Q99569 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.65■□□□□ 0.42
PKP4Q99569 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PKP4Q99569 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PKP4Q99569 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PKP4Q99569 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PKP4Q99569 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.65■□□□□ 0.42
PKP4Q99569 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PKP4Q99569 AC018470.1-201ENST00000624790 3129 ntBASIC17.65■□□□□ 0.42
PKP4Q99569 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PKP4Q99569 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PKP4Q99569 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.65■□□□□ 0.42
PKP4Q99569 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.42
PKP4Q99569 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PKP4Q99569 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PKP4Q99569 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PKP4Q99569 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PKP4Q99569 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.64■□□□□ 0.41
PKP4Q99569 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
PKP4Q99569 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PKP4Q99569 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.64■□□□□ 0.41
PKP4Q99569 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PKP4Q99569 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PKP4Q99569 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PKP4Q99569 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PKP4Q99569 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.64■□□□□ 0.41
PKP4Q99569 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.64■□□□□ 0.41
PKP4Q99569 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.64■□□□□ 0.41
PKP4Q99569 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PKP4Q99569 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PKP4Q99569 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PKP4Q99569 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PKP4Q99569 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PKP4Q99569 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PKP4Q99569 NOC2LP1-202ENST00000452600 2235 ntBASIC17.64■□□□□ 0.41
PKP4Q99569 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PKP4Q99569 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PKP4Q99569 AC132938.6-201ENST00000623828 1655 ntBASIC17.64■□□□□ 0.41
PKP4Q99569 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PKP4Q99569 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PKP4Q99569 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PKP4Q99569 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PKP4Q99569 AC138028.4-201ENST00000564984 1845 ntBASIC17.63■□□□□ 0.41
PKP4Q99569 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.63■□□□□ 0.41
PKP4Q99569 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PKP4Q99569 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PKP4Q99569 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.63■□□□□ 0.41
PKP4Q99569 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PKP4Q99569 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PKP4Q99569 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PKP4Q99569 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.63■□□□□ 0.41
PKP4Q99569 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.63■□□□□ 0.41
PKP4Q99569 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PKP4Q99569 AP003733.1-201ENST00000491725 852 ntBASIC17.63■□□□□ 0.41
PKP4Q99569 AC113404.2-201ENST00000507884 177 ntBASIC17.63■□□□□ 0.41
PKP4Q99569 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.63■□□□□ 0.41
PKP4Q99569 AL590326.2-201ENST00000625139 305 ntBASIC17.63■□□□□ 0.41
PKP4Q99569 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PKP4Q99569 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PKP4Q99569 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PKP4Q99569 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PKP4Q99569 LINC00602-201ENST00000629776 2065 ntBASIC17.63■□□□□ 0.41
PKP4Q99569 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PKP4Q99569 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.63■□□□□ 0.41
PKP4Q99569 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PKP4Q99569 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PKP4Q99569 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.63■□□□□ 0.41
PKP4Q99569 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PKP4Q99569 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PKP4Q99569 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.63■□□□□ 0.41
PKP4Q99569 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PKP4Q99569 LINC00167-201ENST00000530583 1419 ntBASIC17.63■□□□□ 0.41
PKP4Q99569 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PKP4Q99569 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PKP4Q99569 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.62■□□□□ 0.41
PKP4Q99569 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PKP4Q99569 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PKP4Q99569 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PKP4Q99569 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PKP4Q99569 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PKP4Q99569 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.62■□□□□ 0.41
PKP4Q99569 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PKP4Q99569 AL031133.1-201ENST00000406807 723 ntBASIC17.62■□□□□ 0.41
PKP4Q99569 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.62■□□□□ 0.41
PKP4Q99569 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
PKP4Q99569 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.62■□□□□ 0.41
PKP4Q99569 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.62■□□□□ 0.41
PKP4Q99569 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms