Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 AC135776.1-201ENST00000319817 2481 ntBASIC21.23■□□□□ 0.99
CDK5RAP2Q96SN8 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDK5RAP2Q96SN8 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CDK5RAP2Q96SN8 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDK5RAP2Q96SN8 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC21.23■□□□□ 0.99
CDK5RAP2Q96SN8 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CDK5RAP2Q96SN8 AF186996.4-201ENST00000467186 377 ntBASIC21.23■□□□□ 0.99
CDK5RAP2Q96SN8 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDK5RAP2Q96SN8 RPL18-209ENST00000550645 463 ntTSL 5 BASIC21.23■□□□□ 0.99
CDK5RAP2Q96SN8 RPL18-214ENST00000552588 559 ntTSL 3 BASIC21.23■□□□□ 0.99
CDK5RAP2Q96SN8 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21.23■□□□□ 0.99
CDK5RAP2Q96SN8 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC21.23■□□□□ 0.99
CDK5RAP2Q96SN8 AC139887.3-201ENST00000568585 713 ntBASIC21.23■□□□□ 0.99
CDK5RAP2Q96SN8 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CDK5RAP2Q96SN8 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDK5RAP2Q96SN8 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDK5RAP2Q96SN8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDK5RAP2Q96SN8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDK5RAP2Q96SN8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.23■□□□□ 0.99
CDK5RAP2Q96SN8 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CDK5RAP2Q96SN8 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC21.23■□□□□ 0.99
CDK5RAP2Q96SN8 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDK5RAP2Q96SN8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDK5RAP2Q96SN8 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDK5RAP2Q96SN8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
CDK5RAP2Q96SN8 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.22■□□□□ 0.99
CDK5RAP2Q96SN8 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC21.22■□□□□ 0.99
CDK5RAP2Q96SN8 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21.22■□□□□ 0.99
CDK5RAP2Q96SN8 AC073648.2-201ENST00000510116 352 ntBASIC21.22■□□□□ 0.99
CDK5RAP2Q96SN8 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDK5RAP2Q96SN8 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDK5RAP2Q96SN8 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CDK5RAP2Q96SN8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CDK5RAP2Q96SN8 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDK5RAP2Q96SN8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDK5RAP2Q96SN8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDK5RAP2Q96SN8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
CDK5RAP2Q96SN8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.22■□□□□ 0.99
CDK5RAP2Q96SN8 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CDK5RAP2Q96SN8 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CDK5RAP2Q96SN8 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC21.22■□□□□ 0.99
CDK5RAP2Q96SN8 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC21.22■□□□□ 0.99
CDK5RAP2Q96SN8 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC21.22■□□□□ 0.99
CDK5RAP2Q96SN8 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDK5RAP2Q96SN8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC21.22■□□□□ 0.99
CDK5RAP2Q96SN8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
CDK5RAP2Q96SN8 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDK5RAP2Q96SN8 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CDK5RAP2Q96SN8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDK5RAP2Q96SN8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
CDK5RAP2Q96SN8 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.21■□□□□ 0.99
CDK5RAP2Q96SN8 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDK5RAP2Q96SN8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDK5RAP2Q96SN8 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDK5RAP2Q96SN8 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CDK5RAP2Q96SN8 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.21■□□□□ 0.99
CDK5RAP2Q96SN8 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDK5RAP2Q96SN8 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.21■□□□□ 0.99
CDK5RAP2Q96SN8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDK5RAP2Q96SN8 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
CDK5RAP2Q96SN8 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDK5RAP2Q96SN8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDK5RAP2Q96SN8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.21■□□□□ 0.99
CDK5RAP2Q96SN8 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDK5RAP2Q96SN8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.21■□□□□ 0.99
CDK5RAP2Q96SN8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
CDK5RAP2Q96SN8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.2■□□□□ 0.99
CDK5RAP2Q96SN8 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.2■□□□□ 0.99
CDK5RAP2Q96SN8 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
CDK5RAP2Q96SN8 SIGLEC16-201ENST00000599858 1437 ntBASIC21.2■□□□□ 0.98
CDK5RAP2Q96SN8 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDK5RAP2Q96SN8 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDK5RAP2Q96SN8 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDK5RAP2Q96SN8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CDK5RAP2Q96SN8 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC21.2■□□□□ 0.98
CDK5RAP2Q96SN8 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDK5RAP2Q96SN8 MTDHP4-201ENST00000600287 670 ntBASIC21.2■□□□□ 0.98
CDK5RAP2Q96SN8 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDK5RAP2Q96SN8 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC21.2■□□□□ 0.98
CDK5RAP2Q96SN8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.2■□□□□ 0.98
CDK5RAP2Q96SN8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC21.2■□□□□ 0.98
CDK5RAP2Q96SN8 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDK5RAP2Q96SN8 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDK5RAP2Q96SN8 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.2■□□□□ 0.98
CDK5RAP2Q96SN8 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDK5RAP2Q96SN8 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC21.2■□□□□ 0.98
CDK5RAP2Q96SN8 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDK5RAP2Q96SN8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDK5RAP2Q96SN8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDK5RAP2Q96SN8 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDK5RAP2Q96SN8 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC21.2■□□□□ 0.98
CDK5RAP2Q96SN8 HIST2H3DP1-201ENST00000401004 416 ntBASIC21.2■□□□□ 0.98
CDK5RAP2Q96SN8 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDK5RAP2Q96SN8 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC21.2■□□□□ 0.98
CDK5RAP2Q96SN8 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDK5RAP2Q96SN8 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.19■□□□□ 0.98
CDK5RAP2Q96SN8 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDK5RAP2Q96SN8 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC21.19■□□□□ 0.98
CDK5RAP2Q96SN8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDK5RAP2Q96SN8 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms