Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
BBS4Q96RK4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
BBS4Q96RK4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
BBS4Q96RK4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
BBS4Q96RK4 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.21■□□□□ 0.34
BBS4Q96RK4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BBS4Q96RK4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
BBS4Q96RK4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
BBS4Q96RK4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
BBS4Q96RK4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BBS4Q96RK4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
BBS4Q96RK4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BBS4Q96RK4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
BBS4Q96RK4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
BBS4Q96RK4 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.2■□□□□ 0.34
BBS4Q96RK4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.2■□□□□ 0.34
BBS4Q96RK4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.2■□□□□ 0.34
BBS4Q96RK4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.2■□□□□ 0.34
BBS4Q96RK4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.2■□□□□ 0.34
BBS4Q96RK4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
BBS4Q96RK4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
BBS4Q96RK4 AC005363.2-201ENST00000618631 242 ntBASIC17.2■□□□□ 0.34
BBS4Q96RK4 AL138966.2-201ENST00000621997 464 ntBASIC17.2■□□□□ 0.34
BBS4Q96RK4 LETM1P2-201ENST00000597330 2178 ntBASIC17.2■□□□□ 0.34
BBS4Q96RK4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
BBS4Q96RK4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.2■□□□□ 0.34
BBS4Q96RK4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BBS4Q96RK4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BBS4Q96RK4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
BBS4Q96RK4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BBS4Q96RK4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
BBS4Q96RK4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BBS4Q96RK4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BBS4Q96RK4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.19■□□□□ 0.34
BBS4Q96RK4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BBS4Q96RK4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BBS4Q96RK4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
BBS4Q96RK4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.19■□□□□ 0.34
BBS4Q96RK4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.19■□□□□ 0.34
BBS4Q96RK4 AL137013.1-201ENST00000432946 1228 ntBASIC17.19■□□□□ 0.34
BBS4Q96RK4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
BBS4Q96RK4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.19■□□□□ 0.34
BBS4Q96RK4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
BBS4Q96RK4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.19■□□□□ 0.34
BBS4Q96RK4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.19■□□□□ 0.34
BBS4Q96RK4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.19■□□□□ 0.34
BBS4Q96RK4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.19■□□□□ 0.34
BBS4Q96RK4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.19■□□□□ 0.34
BBS4Q96RK4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
BBS4Q96RK4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
BBS4Q96RK4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.19■□□□□ 0.34
BBS4Q96RK4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BBS4Q96RK4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BBS4Q96RK4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BBS4Q96RK4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
BBS4Q96RK4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BBS4Q96RK4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
BBS4Q96RK4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
BBS4Q96RK4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BBS4Q96RK4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.18■□□□□ 0.34
BBS4Q96RK4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BBS4Q96RK4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
BBS4Q96RK4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
BBS4Q96RK4 LINC01126-201ENST00000623515 1646 ntBASIC17.18■□□□□ 0.34
BBS4Q96RK4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
BBS4Q96RK4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
BBS4Q96RK4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
BBS4Q96RK4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.18■□□□□ 0.34
BBS4Q96RK4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
BBS4Q96RK4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
BBS4Q96RK4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.18■□□□□ 0.34
BBS4Q96RK4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.18■□□□□ 0.34
BBS4Q96RK4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.18■□□□□ 0.34
BBS4Q96RK4 AC034232.1-201ENST00000506026 1064 ntBASIC17.18■□□□□ 0.34
BBS4Q96RK4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.18■□□□□ 0.34
BBS4Q96RK4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
BBS4Q96RK4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.18■□□□□ 0.34
BBS4Q96RK4 AL023973.1-201ENST00000624619 620 ntBASIC17.18■□□□□ 0.34
BBS4Q96RK4 AL157888.1-201ENST00000631930 593 ntBASIC17.18■□□□□ 0.34
BBS4Q96RK4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BBS4Q96RK4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.18■□□□□ 0.34
BBS4Q96RK4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
BBS4Q96RK4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.18■□□□□ 0.34
BBS4Q96RK4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
BBS4Q96RK4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.18■□□□□ 0.34
BBS4Q96RK4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
BBS4Q96RK4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BBS4Q96RK4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
BBS4Q96RK4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
BBS4Q96RK4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
BBS4Q96RK4 AL024508.2-201ENST00000607749 1894 ntBASIC17.18■□□□□ 0.34
BBS4Q96RK4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
BBS4Q96RK4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
BBS4Q96RK4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
BBS4Q96RK4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
BBS4Q96RK4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.18■□□□□ 0.34
BBS4Q96RK4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BBS4Q96RK4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.18■□□□□ 0.34
BBS4Q96RK4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
BBS4Q96RK4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms