Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 MTDHP3-201ENST00000594186 672 ntBASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 MIR7706-201ENST00000613747 67 ntBASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 TP73-AS1-210ENST00000637775 1455 ntBASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 AC112777.1-201ENST00000540175 1423 ntBASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC46A1Q96NT5 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SLC46A1Q96NT5 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC46A1Q96NT5 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC46A1Q96NT5 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC46A1Q96NT5 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC46A1Q96NT5 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SLC46A1Q96NT5 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC46A1Q96NT5 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC46A1Q96NT5 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC46A1Q96NT5 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.29■□□□□ 0.36
SLC46A1Q96NT5 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC46A1Q96NT5 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC46A1Q96NT5 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC46A1Q96NT5 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC46A1Q96NT5 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC46A1Q96NT5 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
SLC46A1Q96NT5 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC46A1Q96NT5 AC116407.3-201ENST00000623905 1129 ntBASIC17.29■□□□□ 0.36
SLC46A1Q96NT5 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC46A1Q96NT5 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SLC46A1Q96NT5 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC46A1Q96NT5 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC46A1Q96NT5 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
SLC46A1Q96NT5 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC46A1Q96NT5 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC46A1Q96NT5 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC46A1Q96NT5 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC46A1Q96NT5 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC46A1Q96NT5 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.28■□□□□ 0.36
SLC46A1Q96NT5 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC46A1Q96NT5 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC46A1Q96NT5 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC46A1Q96NT5 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SLC46A1Q96NT5 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
SLC46A1Q96NT5 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC46A1Q96NT5 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC46A1Q96NT5 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC46A1Q96NT5 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC46A1Q96NT5 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC46A1Q96NT5 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC46A1Q96NT5 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.28■□□□□ 0.36
SLC46A1Q96NT5 HNRNPDP1-201ENST00000439535 754 ntBASIC17.28■□□□□ 0.36
SLC46A1Q96NT5 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.28■□□□□ 0.36
SLC46A1Q96NT5 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.28■□□□□ 0.36
SLC46A1Q96NT5 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC46A1Q96NT5 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC46A1Q96NT5 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.28■□□□□ 0.36
SLC46A1Q96NT5 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC46A1Q96NT5 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC46A1Q96NT5 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC46A1Q96NT5 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC46A1Q96NT5 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC46A1Q96NT5 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC46A1Q96NT5 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC46A1Q96NT5 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC46A1Q96NT5 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC46A1Q96NT5 AC093503.3-201ENST00000624917 2352 ntBASIC17.28■□□□□ 0.36
SLC46A1Q96NT5 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC46A1Q96NT5 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.27■□□□□ 0.36
SLC46A1Q96NT5 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
SLC46A1Q96NT5 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC46A1Q96NT5 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC46A1Q96NT5 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.27■□□□□ 0.36
SLC46A1Q96NT5 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC46A1Q96NT5 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC46A1Q96NT5 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC46A1Q96NT5 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SLC46A1Q96NT5 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.27■□□□□ 0.36
SLC46A1Q96NT5 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC46A1Q96NT5 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC46A1Q96NT5 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC46A1Q96NT5 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
SLC46A1Q96NT5 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC46A1Q96NT5 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.27■□□□□ 0.36
SLC46A1Q96NT5 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC46A1Q96NT5 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC46A1Q96NT5 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms