Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 SLC25A6P4-201ENST00000586535 553 ntBASIC14.74□□□□□ -0.05
ZNF48Q96MX3 AL121912.1-201ENST00000603683 238 ntBASIC14.74□□□□□ -0.05
ZNF48Q96MX3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 ANO7L1-203ENST00000602586 1720 ntBASIC14.74□□□□□ -0.05
ZNF48Q96MX3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC14.74□□□□□ -0.05
ZNF48Q96MX3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF48Q96MX3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC14.73□□□□□ -0.05
ZNF48Q96MX3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF48Q96MX3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF48Q96MX3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC14.73□□□□□ -0.05
ZNF48Q96MX3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
ZNF48Q96MX3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF48Q96MX3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF48Q96MX3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF48Q96MX3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF48Q96MX3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.73□□□□□ -0.05
ZNF48Q96MX3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.73□□□□□ -0.05
ZNF48Q96MX3 MRPL3P1-201ENST00000400109 1033 ntBASIC14.73□□□□□ -0.05
ZNF48Q96MX3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF48Q96MX3 NUS1P2-201ENST00000417358 873 ntBASIC14.73□□□□□ -0.05
ZNF48Q96MX3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF48Q96MX3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
ZNF48Q96MX3 VENTXP7-201ENST00000475503 772 ntBASIC14.73□□□□□ -0.05
ZNF48Q96MX3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.73□□□□□ -0.05
ZNF48Q96MX3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF48Q96MX3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF48Q96MX3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.73□□□□□ -0.05
ZNF48Q96MX3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.73□□□□□ -0.05
ZNF48Q96MX3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF48Q96MX3 AC099343.3-201ENST00000605834 2503 ntBASIC14.73□□□□□ -0.05
ZNF48Q96MX3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF48Q96MX3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF48Q96MX3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
ZNF48Q96MX3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF48Q96MX3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.73□□□□□ -0.05
ZNF48Q96MX3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF48Q96MX3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.73□□□□□ -0.05
ZNF48Q96MX3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF48Q96MX3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
ZNF48Q96MX3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF48Q96MX3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
ZNF48Q96MX3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC14.73□□□□□ -0.05
ZNF48Q96MX3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC14.72□□□□□ -0.05
ZNF48Q96MX3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
ZNF48Q96MX3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC14.72□□□□□ -0.05
ZNF48Q96MX3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.72□□□□□ -0.05
ZNF48Q96MX3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
ZNF48Q96MX3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ZNF48Q96MX3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
ZNF48Q96MX3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZNF48Q96MX3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.72□□□□□ -0.05
ZNF48Q96MX3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZNF48Q96MX3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
ZNF48Q96MX3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
ZNF48Q96MX3 AP000593.1-201ENST00000393668 712 ntBASIC14.72□□□□□ -0.05
ZNF48Q96MX3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.72□□□□□ -0.05
ZNF48Q96MX3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
ZNF48Q96MX3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.72□□□□□ -0.05
ZNF48Q96MX3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.72□□□□□ -0.05
ZNF48Q96MX3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.72□□□□□ -0.05
ZNF48Q96MX3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
ZNF48Q96MX3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.72□□□□□ -0.05
ZNF48Q96MX3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ZNF48Q96MX3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZNF48Q96MX3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZNF48Q96MX3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
ZNF48Q96MX3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZNF48Q96MX3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
ZNF48Q96MX3 AC090164.3-201ENST00000610780 2143 ntBASIC14.72□□□□□ -0.05
ZNF48Q96MX3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ZNF48Q96MX3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZNF48Q96MX3 WIZP1-201ENST00000531444 2299 ntBASIC14.72□□□□□ -0.05
ZNF48Q96MX3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
ZNF48Q96MX3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
ZNF48Q96MX3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ZNF48Q96MX3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZNF48Q96MX3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ZNF48Q96MX3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZNF48Q96MX3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
ZNF48Q96MX3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms