Protein–RNA interactions for Protein: Q96B26

EXOSC8, Exosome complex component RRP43, humanhuman

Known RBP Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC8Q96B26 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EXOSC8Q96B26 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
EXOSC8Q96B26 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EXOSC8Q96B26 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
EXOSC8Q96B26 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
EXOSC8Q96B26 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.22■□□□□ 0.35
EXOSC8Q96B26 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.22■□□□□ 0.35
EXOSC8Q96B26 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.22■□□□□ 0.35
EXOSC8Q96B26 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.22■□□□□ 0.35
EXOSC8Q96B26 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.22■□□□□ 0.35
EXOSC8Q96B26 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.22■□□□□ 0.35
EXOSC8Q96B26 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.22■□□□□ 0.35
EXOSC8Q96B26 AC140113.3-201ENST00000605663 199 ntBASIC17.22■□□□□ 0.35
EXOSC8Q96B26 AC012306.2-201ENST00000609350 630 ntBASIC17.22■□□□□ 0.35
EXOSC8Q96B26 AC097493.4-201ENST00000641197 219 ntBASIC17.22■□□□□ 0.35
EXOSC8Q96B26 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
EXOSC8Q96B26 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
EXOSC8Q96B26 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
EXOSC8Q96B26 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EXOSC8Q96B26 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EXOSC8Q96B26 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
EXOSC8Q96B26 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EXOSC8Q96B26 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.22■□□□□ 0.35
EXOSC8Q96B26 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
EXOSC8Q96B26 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
EXOSC8Q96B26 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.21■□□□□ 0.35
EXOSC8Q96B26 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EXOSC8Q96B26 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
EXOSC8Q96B26 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
EXOSC8Q96B26 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
EXOSC8Q96B26 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
EXOSC8Q96B26 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
EXOSC8Q96B26 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EXOSC8Q96B26 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
EXOSC8Q96B26 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
EXOSC8Q96B26 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
EXOSC8Q96B26 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.21■□□□□ 0.35
EXOSC8Q96B26 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
EXOSC8Q96B26 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.21■□□□□ 0.35
EXOSC8Q96B26 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.21■□□□□ 0.35
EXOSC8Q96B26 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EXOSC8Q96B26 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
EXOSC8Q96B26 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.21■□□□□ 0.35
EXOSC8Q96B26 AC113347.1-201ENST00000413321 391 ntBASIC17.21■□□□□ 0.35
EXOSC8Q96B26 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.21■□□□□ 0.35
EXOSC8Q96B26 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
EXOSC8Q96B26 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.21■□□□□ 0.35
EXOSC8Q96B26 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.21■□□□□ 0.35
EXOSC8Q96B26 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
EXOSC8Q96B26 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
EXOSC8Q96B26 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EXOSC8Q96B26 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
EXOSC8Q96B26 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.21■□□□□ 0.35
EXOSC8Q96B26 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
EXOSC8Q96B26 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
EXOSC8Q96B26 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EXOSC8Q96B26 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.21■□□□□ 0.34
EXOSC8Q96B26 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.34
EXOSC8Q96B26 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.21■□□□□ 0.34
EXOSC8Q96B26 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
EXOSC8Q96B26 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EXOSC8Q96B26 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EXOSC8Q96B26 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EXOSC8Q96B26 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EXOSC8Q96B26 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.2■□□□□ 0.34
EXOSC8Q96B26 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.2■□□□□ 0.34
EXOSC8Q96B26 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.2■□□□□ 0.34
EXOSC8Q96B26 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
EXOSC8Q96B26 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EXOSC8Q96B26 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.2■□□□□ 0.34
EXOSC8Q96B26 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.2■□□□□ 0.34
EXOSC8Q96B26 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.2■□□□□ 0.34
EXOSC8Q96B26 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.2■□□□□ 0.34
EXOSC8Q96B26 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
EXOSC8Q96B26 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
EXOSC8Q96B26 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.2■□□□□ 0.34
EXOSC8Q96B26 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EXOSC8Q96B26 AC008764.6-201ENST00000595909 2069 ntBASIC17.2■□□□□ 0.34
EXOSC8Q96B26 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EXOSC8Q96B26 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EXOSC8Q96B26 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EXOSC8Q96B26 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EXOSC8Q96B26 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.2■□□□□ 0.34
EXOSC8Q96B26 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
EXOSC8Q96B26 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EXOSC8Q96B26 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.2■□□□□ 0.34
EXOSC8Q96B26 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EXOSC8Q96B26 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EXOSC8Q96B26 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
EXOSC8Q96B26 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.2■□□□□ 0.34
EXOSC8Q96B26 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EXOSC8Q96B26 AP000997.3-201ENST00000623333 2250 ntBASIC17.19■□□□□ 0.34
EXOSC8Q96B26 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
EXOSC8Q96B26 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
EXOSC8Q96B26 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
EXOSC8Q96B26 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
EXOSC8Q96B26 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
EXOSC8Q96B26 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
EXOSC8Q96B26 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EXOSC8Q96B26 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms