Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CKAP2Q8WWK9 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CKAP2Q8WWK9 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CKAP2Q8WWK9 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
CKAP2Q8WWK9 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CKAP2Q8WWK9 AC105020.1-201ENST00000435356 2205 ntBASIC18.02■□□□□ 0.47
CKAP2Q8WWK9 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.02■□□□□ 0.47
CKAP2Q8WWK9 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
CKAP2Q8WWK9 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 AC009102.3-201ENST00000623118 1491 ntBASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 CROCCP5-201ENST00000436658 830 ntBASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 CKBP1-201ENST00000565489 1086 ntBASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 AC083880.1-201ENST00000608266 535 ntBASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 AC008622.2-201ENST00000617006 1229 ntBASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 AL163051.1-201ENST00000569214 1512 ntBASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.01■□□□□ 0.47
CKAP2Q8WWK9 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18■□□□□ 0.47
CKAP2Q8WWK9 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18■□□□□ 0.47
CKAP2Q8WWK9 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18■□□□□ 0.47
CKAP2Q8WWK9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18■□□□□ 0.47
CKAP2Q8WWK9 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18■□□□□ 0.47
CKAP2Q8WWK9 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18■□□□□ 0.47
CKAP2Q8WWK9 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18■□□□□ 0.47
CKAP2Q8WWK9 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18■□□□□ 0.47
CKAP2Q8WWK9 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CKAP2Q8WWK9 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18■□□□□ 0.47
CKAP2Q8WWK9 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CKAP2Q8WWK9 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18■□□□□ 0.47
CKAP2Q8WWK9 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CKAP2Q8WWK9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CKAP2Q8WWK9 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18■□□□□ 0.47
CKAP2Q8WWK9 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CKAP2Q8WWK9 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CKAP2Q8WWK9 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18■□□□□ 0.47
CKAP2Q8WWK9 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CKAP2Q8WWK9 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18■□□□□ 0.47
CKAP2Q8WWK9 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CKAP2Q8WWK9 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18■□□□□ 0.47
CKAP2Q8WWK9 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CKAP2Q8WWK9 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CKAP2Q8WWK9 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CKAP2Q8WWK9 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18■□□□□ 0.47
CKAP2Q8WWK9 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CKAP2Q8WWK9 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CKAP2Q8WWK9 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18■□□□□ 0.47
CKAP2Q8WWK9 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
CKAP2Q8WWK9 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CKAP2Q8WWK9 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CKAP2Q8WWK9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.99■□□□□ 0.47
CKAP2Q8WWK9 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CKAP2Q8WWK9 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CKAP2Q8WWK9 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CKAP2Q8WWK9 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CKAP2Q8WWK9 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CKAP2Q8WWK9 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CKAP2Q8WWK9 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CKAP2Q8WWK9 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CKAP2Q8WWK9 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CKAP2Q8WWK9 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CKAP2Q8WWK9 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CKAP2Q8WWK9 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.99■□□□□ 0.47
CKAP2Q8WWK9 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CKAP2Q8WWK9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CKAP2Q8WWK9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CKAP2Q8WWK9 ID1-201ENST00000376105 1233 ntBASIC17.99■□□□□ 0.47
CKAP2Q8WWK9 MIR149-201ENST00000384879 89 ntBASIC17.99■□□□□ 0.47
CKAP2Q8WWK9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms