Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
TRAF3IP1Q8TDR0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAF3IP1Q8TDR0 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAF3IP1Q8TDR0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAF3IP1Q8TDR0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAF3IP1Q8TDR0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAF3IP1Q8TDR0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAF3IP1Q8TDR0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAF3IP1Q8TDR0 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAF3IP1Q8TDR0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAF3IP1Q8TDR0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAF3IP1Q8TDR0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.92■□□□□ 0.62
TRAF3IP1Q8TDR0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 SEC1P-202ENST00000473944 940 ntBASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 AC092865.7-201ENST00000641832 219 ntBASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 AC005332.8-201ENST00000622750 2735 ntBASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF3IP1Q8TDR0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 AC087499.1-201ENST00000418141 1075 ntBASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAF3IP1Q8TDR0 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.89■□□□□ 0.62
TRAF3IP1Q8TDR0 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAF3IP1Q8TDR0 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAF3IP1Q8TDR0 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAF3IP1Q8TDR0 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAF3IP1Q8TDR0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAF3IP1Q8TDR0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAF3IP1Q8TDR0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.89■□□□□ 0.61
TRAF3IP1Q8TDR0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.89■□□□□ 0.61
TRAF3IP1Q8TDR0 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.89■□□□□ 0.61
TRAF3IP1Q8TDR0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
TRAF3IP1Q8TDR0 ECEL1P3-201ENST00000427961 737 ntBASIC18.89■□□□□ 0.61
TRAF3IP1Q8TDR0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.89■□□□□ 0.61
TRAF3IP1Q8TDR0 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.89■□□□□ 0.61
TRAF3IP1Q8TDR0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAF3IP1Q8TDR0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.89■□□□□ 0.61
TRAF3IP1Q8TDR0 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.89■□□□□ 0.61
TRAF3IP1Q8TDR0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAF3IP1Q8TDR0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.89■□□□□ 0.61
TRAF3IP1Q8TDR0 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms