Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
UBA3Q8TBC4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
UBA3Q8TBC4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.19■□□□□ 0.66
UBA3Q8TBC4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBA3Q8TBC4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.19■□□□□ 0.66
UBA3Q8TBC4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.19■□□□□ 0.66
UBA3Q8TBC4 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.19■□□□□ 0.66
UBA3Q8TBC4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.19■□□□□ 0.66
UBA3Q8TBC4 AC011498.5-201ENST00000592027 486 ntBASIC19.19■□□□□ 0.66
UBA3Q8TBC4 AC008687.5-201ENST00000593746 558 ntBASIC19.19■□□□□ 0.66
UBA3Q8TBC4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.19■□□□□ 0.66
UBA3Q8TBC4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
UBA3Q8TBC4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBA3Q8TBC4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBA3Q8TBC4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.19■□□□□ 0.66
UBA3Q8TBC4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBA3Q8TBC4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBA3Q8TBC4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBA3Q8TBC4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBA3Q8TBC4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBA3Q8TBC4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBA3Q8TBC4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
UBA3Q8TBC4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBA3Q8TBC4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBA3Q8TBC4 LINC00167-201ENST00000530583 1419 ntBASIC19.18■□□□□ 0.66
UBA3Q8TBC4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
UBA3Q8TBC4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
UBA3Q8TBC4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBA3Q8TBC4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBA3Q8TBC4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UBA3Q8TBC4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBA3Q8TBC4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBA3Q8TBC4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.18■□□□□ 0.66
UBA3Q8TBC4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBA3Q8TBC4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UBA3Q8TBC4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.18■□□□□ 0.66
UBA3Q8TBC4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBA3Q8TBC4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBA3Q8TBC4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBA3Q8TBC4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
UBA3Q8TBC4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.18■□□□□ 0.66
UBA3Q8TBC4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBA3Q8TBC4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBA3Q8TBC4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBA3Q8TBC4 AC113404.2-201ENST00000507884 177 ntBASIC19.18■□□□□ 0.66
UBA3Q8TBC4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.18■□□□□ 0.66
UBA3Q8TBC4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.18■□□□□ 0.66
UBA3Q8TBC4 GPR32P1-201ENST00000601788 811 ntBASIC19.18■□□□□ 0.66
UBA3Q8TBC4 AC116407.4-201ENST00000623319 1061 ntBASIC19.18■□□□□ 0.66
UBA3Q8TBC4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
UBA3Q8TBC4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBA3Q8TBC4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBA3Q8TBC4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBA3Q8TBC4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBA3Q8TBC4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBA3Q8TBC4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBA3Q8TBC4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBA3Q8TBC4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UBA3Q8TBC4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.18■□□□□ 0.66
UBA3Q8TBC4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 AC018470.1-201ENST00000624790 3129 ntBASIC19.17■□□□□ 0.66
UBA3Q8TBC4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 AL390719.2-201ENST00000606993 987 ntBASIC19.17■□□□□ 0.66
UBA3Q8TBC4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 IER3-202ENST00000376377 1350 ntBASIC19.17■□□□□ 0.66
UBA3Q8TBC4 AL353692.3-201ENST00000407031 1396 ntBASIC19.17■□□□□ 0.66
UBA3Q8TBC4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBA3Q8TBC4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBA3Q8TBC4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBA3Q8TBC4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms