Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNIP1Q8TAD8 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNIP1Q8TAD8 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SNIP1Q8TAD8 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.05■□□□□ 0.32
SNIP1Q8TAD8 METTL21AP1-201ENST00000438852 635 ntBASIC17.05■□□□□ 0.32
SNIP1Q8TAD8 RFPL4AP1-201ENST00000530883 850 ntBASIC17.05■□□□□ 0.32
SNIP1Q8TAD8 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.05■□□□□ 0.32
SNIP1Q8TAD8 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.05■□□□□ 0.32
SNIP1Q8TAD8 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.05■□□□□ 0.32
SNIP1Q8TAD8 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.05■□□□□ 0.32
SNIP1Q8TAD8 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.05■□□□□ 0.32
SNIP1Q8TAD8 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNIP1Q8TAD8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNIP1Q8TAD8 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNIP1Q8TAD8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNIP1Q8TAD8 AL163051.1-201ENST00000569214 1512 ntBASIC17.05■□□□□ 0.32
SNIP1Q8TAD8 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNIP1Q8TAD8 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
SNIP1Q8TAD8 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNIP1Q8TAD8 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
SNIP1Q8TAD8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SNIP1Q8TAD8 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.05■□□□□ 0.32
SNIP1Q8TAD8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 HTR5BP-201ENST00000430851 1154 ntBASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 AC007967.2-201ENST00000432613 625 ntBASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 KRT18P41-201ENST00000518924 1277 ntBASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 AC125634.1-201ENST00000438758 1403 ntBASIC17.04■□□□□ 0.32
SNIP1Q8TAD8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNIP1Q8TAD8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.03■□□□□ 0.32
SNIP1Q8TAD8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNIP1Q8TAD8 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.03■□□□□ 0.32
SNIP1Q8TAD8 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNIP1Q8TAD8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNIP1Q8TAD8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNIP1Q8TAD8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SNIP1Q8TAD8 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SNIP1Q8TAD8 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNIP1Q8TAD8 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNIP1Q8TAD8 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNIP1Q8TAD8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNIP1Q8TAD8 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
SNIP1Q8TAD8 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.03■□□□□ 0.32
SNIP1Q8TAD8 LAGE3P1-201ENST00000425356 484 ntBASIC17.03■□□□□ 0.32
SNIP1Q8TAD8 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.03■□□□□ 0.32
SNIP1Q8TAD8 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.03■□□□□ 0.32
SNIP1Q8TAD8 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.03■□□□□ 0.32
SNIP1Q8TAD8 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.03■□□□□ 0.32
SNIP1Q8TAD8 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.03■□□□□ 0.32
SNIP1Q8TAD8 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNIP1Q8TAD8 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.03■□□□□ 0.32
SNIP1Q8TAD8 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.03■□□□□ 0.32
SNIP1Q8TAD8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.03■□□□□ 0.32
SNIP1Q8TAD8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNIP1Q8TAD8 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNIP1Q8TAD8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNIP1Q8TAD8 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNIP1Q8TAD8 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNIP1Q8TAD8 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SNIP1Q8TAD8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNIP1Q8TAD8 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNIP1Q8TAD8 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.02■□□□□ 0.32
SNIP1Q8TAD8 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SNIP1Q8TAD8 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNIP1Q8TAD8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SNIP1Q8TAD8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNIP1Q8TAD8 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNIP1Q8TAD8 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNIP1Q8TAD8 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms