Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
SPTSSBQ8NFR3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC9.96□□□□□ -0.82
SPTSSBQ8NFR3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
SPTSSBQ8NFR3 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
SPTSSBQ8NFR3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 RPS2P35-201ENST00000443417 897 ntBASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 AL117332.1-201ENST00000622628 974 ntBASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 AC009237.14-201ENST00000609975 1594 ntBASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
SPTSSBQ8NFR3 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 FP325330.2-201ENST00000624219 5630 ntBASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms