Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PNMA1Q8ND90 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PNMA1Q8ND90 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.04■□□□□ 0.96
PNMA1Q8ND90 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PNMA1Q8ND90 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.03■□□□□ 0.96
PNMA1Q8ND90 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
PNMA1Q8ND90 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PNMA1Q8ND90 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PNMA1Q8ND90 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PNMA1Q8ND90 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.03■□□□□ 0.96
PNMA1Q8ND90 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.03■□□□□ 0.96
PNMA1Q8ND90 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PNMA1Q8ND90 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.03■□□□□ 0.96
PNMA1Q8ND90 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PNMA1Q8ND90 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PNMA1Q8ND90 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PNMA1Q8ND90 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PNMA1Q8ND90 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PNMA1Q8ND90 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PNMA1Q8ND90 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PNMA1Q8ND90 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PNMA1Q8ND90 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PNMA1Q8ND90 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
PNMA1Q8ND90 DUSP5P1-201ENST00000441325 1139 ntBASIC21.03■□□□□ 0.96
PNMA1Q8ND90 AC104819.1-201ENST00000504587 486 ntBASIC21.03■□□□□ 0.96
PNMA1Q8ND90 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.03■□□□□ 0.96
PNMA1Q8ND90 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.03■□□□□ 0.96
PNMA1Q8ND90 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.03■□□□□ 0.96
PNMA1Q8ND90 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PNMA1Q8ND90 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PNMA1Q8ND90 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 IGHV3-47-201ENST00000425060 335 ntBASIC21.02■□□□□ 0.96
PNMA1Q8ND90 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 AC112698.1-201ENST00000510299 916 ntBASIC21.02■□□□□ 0.96
PNMA1Q8ND90 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PNMA1Q8ND90 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PNMA1Q8ND90 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.02■□□□□ 0.95
PNMA1Q8ND90 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PNMA1Q8ND90 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.01■□□□□ 0.95
PNMA1Q8ND90 BICD1-207ENST00000551848 1962 ntBASIC21.01■□□□□ 0.95
PNMA1Q8ND90 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PNMA1Q8ND90 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.01■□□□□ 0.95
PNMA1Q8ND90 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.01■□□□□ 0.95
PNMA1Q8ND90 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PNMA1Q8ND90 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PNMA1Q8ND90 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PNMA1Q8ND90 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PNMA1Q8ND90 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PNMA1Q8ND90 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.01■□□□□ 0.95
PNMA1Q8ND90 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.01■□□□□ 0.95
PNMA1Q8ND90 DUTP2-201ENST00000519164 463 ntBASIC21.01■□□□□ 0.95
PNMA1Q8ND90 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.01■□□□□ 0.95
PNMA1Q8ND90 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PNMA1Q8ND90 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PNMA1Q8ND90 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PNMA1Q8ND90 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PNMA1Q8ND90 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PNMA1Q8ND90 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PNMA1Q8ND90 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21■□□□□ 0.95
PNMA1Q8ND90 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PNMA1Q8ND90 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21■□□□□ 0.95
PNMA1Q8ND90 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21■□□□□ 0.95
PNMA1Q8ND90 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PNMA1Q8ND90 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21■□□□□ 0.95
PNMA1Q8ND90 NSUN5P1-202ENST00000421140 1535 ntBASIC21■□□□□ 0.95
PNMA1Q8ND90 NSUN5P2-203ENST00000457352 1529 ntBASIC21■□□□□ 0.95
PNMA1Q8ND90 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
PNMA1Q8ND90 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms