Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 AL353801.3-201ENST00000609898 542 ntBASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01555Q8NAE3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 MTCL1P1-201ENST00000446207 792 ntBASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 AC091607.1-201ENST00000490318 1060 ntBASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 AL390961.4-201ENST00000623958 2535 ntBASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01555Q8NAE3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
LINC01555Q8NAE3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 HCG4P8-203ENST00000443049 980 ntBASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 TOB2P1-201ENST00000469761 992 ntBASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 AP005901.3-202ENST00000581653 237 ntBASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 AC092329.2-201ENST00000598402 547 ntBASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01555Q8NAE3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms