Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CLDN22Q8N7P3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN22Q8N7P3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN22Q8N7P3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CLDN22Q8N7P3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN22Q8N7P3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN22Q8N7P3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN22Q8N7P3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN22Q8N7P3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.53■□□□□ 0.24
CLDN22Q8N7P3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CLDN22Q8N7P3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.53■□□□□ 0.24
CLDN22Q8N7P3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
CLDN22Q8N7P3 AC009065.1-201ENST00000564055 1225 ntBASIC16.53■□□□□ 0.24
CLDN22Q8N7P3 AP005242.2-201ENST00000580065 1175 ntBASIC16.53■□□□□ 0.24
CLDN22Q8N7P3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
CLDN22Q8N7P3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN22Q8N7P3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN22Q8N7P3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CLDN22Q8N7P3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.53■□□□□ 0.24
CLDN22Q8N7P3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN22Q8N7P3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN22Q8N7P3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN22Q8N7P3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN22Q8N7P3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CLDN22Q8N7P3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN22Q8N7P3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.52■□□□□ 0.24
CLDN22Q8N7P3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN22Q8N7P3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN22Q8N7P3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN22Q8N7P3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN22Q8N7P3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CLDN22Q8N7P3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
CLDN22Q8N7P3 MIR1238-201ENST00000408483 83 ntBASIC16.52■□□□□ 0.24
CLDN22Q8N7P3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.52■□□□□ 0.24
CLDN22Q8N7P3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CLDN22Q8N7P3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN22Q8N7P3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN22Q8N7P3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.52■□□□□ 0.24
CLDN22Q8N7P3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.52■□□□□ 0.24
CLDN22Q8N7P3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN22Q8N7P3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CLDN22Q8N7P3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.52■□□□□ 0.23
CLDN22Q8N7P3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN22Q8N7P3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN22Q8N7P3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN22Q8N7P3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN22Q8N7P3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.52■□□□□ 0.23
CLDN22Q8N7P3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN22Q8N7P3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.52■□□□□ 0.23
CLDN22Q8N7P3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN22Q8N7P3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 AC084018.2-201ENST00000613093 2607 ntBASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 AC106820.2-201ENST00000563775 3264 ntBASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 AP003041.3-201ENST00000527151 707 ntBASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 MIR3180-4-201ENST00000582223 153 ntBASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 AL023803.3-201ENST00000615559 522 ntBASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 AP006294.2-201ENST00000641667 209 ntBASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN22Q8N7P3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN22Q8N7P3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.5■□□□□ 0.23
CLDN22Q8N7P3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.5■□□□□ 0.23
CLDN22Q8N7P3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN22Q8N7P3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN22Q8N7P3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CLDN22Q8N7P3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CLDN22Q8N7P3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN22Q8N7P3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN22Q8N7P3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms