Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TTC39CQ8N584 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TTC39CQ8N584 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TTC39CQ8N584 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TTC39CQ8N584 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TTC39CQ8N584 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TTC39CQ8N584 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TTC39CQ8N584 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.25■□□□□ 0.67
TTC39CQ8N584 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
TTC39CQ8N584 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
TTC39CQ8N584 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TTC39CQ8N584 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TTC39CQ8N584 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
TTC39CQ8N584 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TTC39CQ8N584 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TTC39CQ8N584 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TTC39CQ8N584 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TTC39CQ8N584 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.24■□□□□ 0.67
TTC39CQ8N584 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TTC39CQ8N584 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.24■□□□□ 0.67
TTC39CQ8N584 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TTC39CQ8N584 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.24■□□□□ 0.67
TTC39CQ8N584 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TTC39CQ8N584 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.24■□□□□ 0.67
TTC39CQ8N584 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.24■□□□□ 0.67
TTC39CQ8N584 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TTC39CQ8N584 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.24■□□□□ 0.67
TTC39CQ8N584 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.24■□□□□ 0.67
TTC39CQ8N584 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TTC39CQ8N584 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
TTC39CQ8N584 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.24■□□□□ 0.67
TTC39CQ8N584 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.24■□□□□ 0.67
TTC39CQ8N584 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TTC39CQ8N584 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TTC39CQ8N584 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TTC39CQ8N584 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.24■□□□□ 0.67
TTC39CQ8N584 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TTC39CQ8N584 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TTC39CQ8N584 AL390961.4-201ENST00000623958 2535 ntBASIC19.23■□□□□ 0.67
TTC39CQ8N584 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TTC39CQ8N584 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TTC39CQ8N584 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TTC39CQ8N584 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TTC39CQ8N584 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TTC39CQ8N584 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TTC39CQ8N584 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TTC39CQ8N584 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TTC39CQ8N584 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TTC39CQ8N584 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TTC39CQ8N584 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TTC39CQ8N584 CHCHD2P8-201ENST00000429873 447 ntBASIC19.23■□□□□ 0.67
TTC39CQ8N584 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.23■□□□□ 0.67
TTC39CQ8N584 AL358472.4-201ENST00000633140 710 ntBASIC19.23■□□□□ 0.67
TTC39CQ8N584 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.23■□□□□ 0.67
TTC39CQ8N584 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TTC39CQ8N584 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.23■□□□□ 0.67
TTC39CQ8N584 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TTC39CQ8N584 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TTC39CQ8N584 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.23■□□□□ 0.67
TTC39CQ8N584 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TTC39CQ8N584 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.23■□□□□ 0.67
TTC39CQ8N584 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TTC39CQ8N584 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.23■□□□□ 0.67
TTC39CQ8N584 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TTC39CQ8N584 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.23■□□□□ 0.67
TTC39CQ8N584 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TTC39CQ8N584 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TTC39CQ8N584 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.23■□□□□ 0.67
TTC39CQ8N584 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.23■□□□□ 0.67
TTC39CQ8N584 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TTC39CQ8N584 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39CQ8N584 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39CQ8N584 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
TTC39CQ8N584 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39CQ8N584 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39CQ8N584 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39CQ8N584 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39CQ8N584 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.22■□□□□ 0.67
TTC39CQ8N584 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39CQ8N584 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39CQ8N584 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39CQ8N584 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39CQ8N584 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39CQ8N584 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.22■□□□□ 0.67
TTC39CQ8N584 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39CQ8N584 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39CQ8N584 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39CQ8N584 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.22■□□□□ 0.67
TTC39CQ8N584 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.22■□□□□ 0.67
TTC39CQ8N584 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.22■□□□□ 0.67
TTC39CQ8N584 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39CQ8N584 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39CQ8N584 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39CQ8N584 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39CQ8N584 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.22■□□□□ 0.67
TTC39CQ8N584 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39CQ8N584 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39CQ8N584 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39CQ8N584 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TTC39CQ8N584 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms