Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PGBD3Q8N328 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PGBD3Q8N328 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PGBD3Q8N328 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.39■□□□□ 0.53
PGBD3Q8N328 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.39■□□□□ 0.53
PGBD3Q8N328 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PGBD3Q8N328 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.39■□□□□ 0.53
PGBD3Q8N328 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PGBD3Q8N328 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.39■□□□□ 0.53
PGBD3Q8N328 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PGBD3Q8N328 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.39■□□□□ 0.53
PGBD3Q8N328 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PGBD3Q8N328 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD3Q8N328 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD3Q8N328 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD3Q8N328 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD3Q8N328 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD3Q8N328 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD3Q8N328 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PGBD3Q8N328 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD3Q8N328 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD3Q8N328 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD3Q8N328 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD3Q8N328 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD3Q8N328 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD3Q8N328 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.38■□□□□ 0.53
PGBD3Q8N328 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.38■□□□□ 0.53
PGBD3Q8N328 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.38■□□□□ 0.53
PGBD3Q8N328 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.38■□□□□ 0.53
PGBD3Q8N328 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD3Q8N328 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.38■□□□□ 0.53
PGBD3Q8N328 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD3Q8N328 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD3Q8N328 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
PGBD3Q8N328 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD3Q8N328 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD3Q8N328 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD3Q8N328 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD3Q8N328 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
PGBD3Q8N328 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD3Q8N328 MTMR9LP-203ENST00000426597 1545 ntBASIC18.38■□□□□ 0.53
PGBD3Q8N328 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.38■□□□□ 0.53
PGBD3Q8N328 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PGBD3Q8N328 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PGBD3Q8N328 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.37■□□□□ 0.53
PGBD3Q8N328 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.37■□□□□ 0.53
PGBD3Q8N328 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PGBD3Q8N328 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD3Q8N328 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD3Q8N328 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD3Q8N328 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD3Q8N328 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD3Q8N328 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD3Q8N328 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD3Q8N328 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD3Q8N328 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD3Q8N328 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD3Q8N328 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD3Q8N328 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD3Q8N328 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD3Q8N328 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD3Q8N328 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD3Q8N328 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD3Q8N328 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.37■□□□□ 0.53
PGBD3Q8N328 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PGBD3Q8N328 TSPY12P-201ENST00000421279 868 ntBASIC18.37■□□□□ 0.53
PGBD3Q8N328 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.37■□□□□ 0.53
PGBD3Q8N328 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.37■□□□□ 0.53
PGBD3Q8N328 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD3Q8N328 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.37■□□□□ 0.53
PGBD3Q8N328 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD3Q8N328 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.37■□□□□ 0.53
PGBD3Q8N328 MIR5100-201ENST00000579544 119 ntBASIC18.37■□□□□ 0.53
PGBD3Q8N328 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.37■□□□□ 0.53
PGBD3Q8N328 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.37■□□□□ 0.53
PGBD3Q8N328 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.37■□□□□ 0.53
PGBD3Q8N328 BX640515.1-201ENST00000617215 977 ntBASIC18.37■□□□□ 0.53
PGBD3Q8N328 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.37■□□□□ 0.53
PGBD3Q8N328 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD3Q8N328 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD3Q8N328 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD3Q8N328 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD3Q8N328 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD3Q8N328 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD3Q8N328 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD3Q8N328 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD3Q8N328 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD3Q8N328 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD3Q8N328 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
PGBD3Q8N328 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD3Q8N328 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD3Q8N328 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD3Q8N328 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
PGBD3Q8N328 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PGBD3Q8N328 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PGBD3Q8N328 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PGBD3Q8N328 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PGBD3Q8N328 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.36■□□□□ 0.53
PGBD3Q8N328 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PGBD3Q8N328 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms