Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HIST3H2BBQ8N257 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
HIST3H2BBQ8N257 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
HIST3H2BBQ8N257 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
HIST3H2BBQ8N257 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.52□□□□□ -0.24
HIST3H2BBQ8N257 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HIST3H2BBQ8N257 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
HIST3H2BBQ8N257 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
HIST3H2BBQ8N257 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.52□□□□□ -0.24
HIST3H2BBQ8N257 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
HIST3H2BBQ8N257 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST3H2BBQ8N257 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST3H2BBQ8N257 HLA-G-202ENST00000376815 851 ntBASIC13.52□□□□□ -0.25
HIST3H2BBQ8N257 HLA-G-203ENST00000376818 1127 ntBASIC13.52□□□□□ -0.25
HIST3H2BBQ8N257 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST3H2BBQ8N257 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC13.52□□□□□ -0.25
HIST3H2BBQ8N257 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC13.52□□□□□ -0.25
HIST3H2BBQ8N257 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
HIST3H2BBQ8N257 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.52□□□□□ -0.25
HIST3H2BBQ8N257 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC13.52□□□□□ -0.25
HIST3H2BBQ8N257 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HIST3H2BBQ8N257 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC13.52□□□□□ -0.25
HIST3H2BBQ8N257 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
HIST3H2BBQ8N257 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.52□□□□□ -0.25
HIST3H2BBQ8N257 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HIST3H2BBQ8N257 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST3H2BBQ8N257 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HIST3H2BBQ8N257 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST3H2BBQ8N257 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
HIST3H2BBQ8N257 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.52□□□□□ -0.25
HIST3H2BBQ8N257 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
HIST3H2BBQ8N257 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
HIST3H2BBQ8N257 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST3H2BBQ8N257 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST3H2BBQ8N257 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST3H2BBQ8N257 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST3H2BBQ8N257 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.52□□□□□ -0.25
HIST3H2BBQ8N257 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 NFYC-AS1-201ENST00000606277 1687 ntBASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 AC018553.1-201ENST00000616682 1458 ntBASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 AC005915.1-201ENST00000624912 2018 ntBASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HIST3H2BBQ8N257 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HIST3H2BBQ8N257 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST3H2BBQ8N257 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.5□□□□□ -0.25
HIST3H2BBQ8N257 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST3H2BBQ8N257 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST3H2BBQ8N257 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.5□□□□□ -0.25
HIST3H2BBQ8N257 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HIST3H2BBQ8N257 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC13.5□□□□□ -0.25
HIST3H2BBQ8N257 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST3H2BBQ8N257 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST3H2BBQ8N257 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HIST3H2BBQ8N257 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.5□□□□□ -0.25
HIST3H2BBQ8N257 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.5□□□□□ -0.25
HIST3H2BBQ8N257 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
HIST3H2BBQ8N257 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST3H2BBQ8N257 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.5□□□□□ -0.25
HIST3H2BBQ8N257 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
HIST3H2BBQ8N257 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HIST3H2BBQ8N257 SAPCD2P1-201ENST00000395413 1184 ntBASIC13.5□□□□□ -0.25
HIST3H2BBQ8N257 AC091799.1-201ENST00000422823 811 ntBASIC13.5□□□□□ -0.25
HIST3H2BBQ8N257 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HIST3H2BBQ8N257 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST3H2BBQ8N257 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HIST3H2BBQ8N257 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST3H2BBQ8N257 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST3H2BBQ8N257 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST3H2BBQ8N257 TNRC18P2-201ENST00000417666 2714 ntBASIC13.5□□□□□ -0.25
HIST3H2BBQ8N257 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms