Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 KRT17P1-201ENST00000399211 1546 ntBASIC15.09■□□□□ 0.01
ZNF546Q86UE3 AP006587.1-201ENST00000534129 1502 ntBASIC15.09■□□□□ 0.01
ZNF546Q86UE3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 AC007322.1-201ENST00000426983 750 ntBASIC15.09■□□□□ 0.01
ZNF546Q86UE3 GXYLT1P2-201ENST00000433312 1230 ntBASIC15.09■□□□□ 0.01
ZNF546Q86UE3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 BID-214ENST00000617586 542 ntTSL 5 BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 AC106886.4-201ENST00000623557 2502 ntBASIC15.09■□□□□ 0.01
ZNF546Q86UE3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF546Q86UE3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
ZNF546Q86UE3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ZNF546Q86UE3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
ZNF546Q86UE3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ZNF546Q86UE3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ZNF546Q86UE3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
ZNF546Q86UE3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ZNF546Q86UE3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
ZNF546Q86UE3 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
ZNF546Q86UE3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ZNF546Q86UE3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.08■□□□□ 0.01
ZNF546Q86UE3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ZNF546Q86UE3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.08■□□□□ 0.01
ZNF546Q86UE3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.08■□□□□ 0
ZNF546Q86UE3 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF546Q86UE3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF546Q86UE3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF546Q86UE3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
ZNF546Q86UE3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.08■□□□□ 0
ZNF546Q86UE3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF546Q86UE3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF546Q86UE3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
ZNF546Q86UE3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC15.08■□□□□ 0
ZNF546Q86UE3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF546Q86UE3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.08■□□□□ 0
ZNF546Q86UE3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC15.08■□□□□ 0
ZNF546Q86UE3 AL512625.2-201ENST00000417533 625 ntBASIC15.08■□□□□ 0
ZNF546Q86UE3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF546Q86UE3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC15.08■□□□□ 0
ZNF546Q86UE3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC15.08■□□□□ 0
ZNF546Q86UE3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC15.08■□□□□ 0
ZNF546Q86UE3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC15.08■□□□□ 0
ZNF546Q86UE3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC15.08■□□□□ 0
ZNF546Q86UE3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF546Q86UE3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.08■□□□□ 0
ZNF546Q86UE3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.08■□□□□ 0
ZNF546Q86UE3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF546Q86UE3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.08■□□□□ 0
ZNF546Q86UE3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF546Q86UE3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF546Q86UE3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF546Q86UE3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF546Q86UE3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.08■□□□□ 0
ZNF546Q86UE3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF546Q86UE3 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF546Q86UE3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF546Q86UE3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF546Q86UE3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF546Q86UE3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF546Q86UE3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.07■□□□□ 0
ZNF546Q86UE3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
ZNF546Q86UE3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
ZNF546Q86UE3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.07■□□□□ 0
ZNF546Q86UE3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF546Q86UE3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms