Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PDZRN4Q6ZMN7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDZRN4Q6ZMN7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PDZRN4Q6ZMN7 CYP2D8P-201ENST00000433633 1490 ntBASIC20.87■□□□□ 0.93
PDZRN4Q6ZMN7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDZRN4Q6ZMN7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDZRN4Q6ZMN7 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PDZRN4Q6ZMN7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
PDZRN4Q6ZMN7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
PDZRN4Q6ZMN7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
PDZRN4Q6ZMN7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PDZRN4Q6ZMN7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDZRN4Q6ZMN7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC20.86■□□□□ 0.93
PDZRN4Q6ZMN7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDZRN4Q6ZMN7 AL356309.3-201ENST00000624132 1934 ntBASIC20.86■□□□□ 0.93
PDZRN4Q6ZMN7 CICP6-201ENST00000457191 2729 ntBASIC20.86■□□□□ 0.93
PDZRN4Q6ZMN7 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDZRN4Q6ZMN7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.86■□□□□ 0.93
PDZRN4Q6ZMN7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC20.86■□□□□ 0.93
PDZRN4Q6ZMN7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDZRN4Q6ZMN7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDZRN4Q6ZMN7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDZRN4Q6ZMN7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.86■□□□□ 0.93
PDZRN4Q6ZMN7 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDZRN4Q6ZMN7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDZRN4Q6ZMN7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.86■□□□□ 0.93
PDZRN4Q6ZMN7 AC011506.1-201ENST00000474329 610 ntBASIC20.86■□□□□ 0.93
PDZRN4Q6ZMN7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.86■□□□□ 0.93
PDZRN4Q6ZMN7 AP005242.2-201ENST00000580065 1175 ntBASIC20.86■□□□□ 0.93
PDZRN4Q6ZMN7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.86■□□□□ 0.93
PDZRN4Q6ZMN7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.86■□□□□ 0.93
PDZRN4Q6ZMN7 AC005363.2-201ENST00000618631 242 ntBASIC20.86■□□□□ 0.93
PDZRN4Q6ZMN7 HLA-A-209ENST00000638375 975 ntBASIC20.86■□□□□ 0.93
PDZRN4Q6ZMN7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.86■□□□□ 0.93
PDZRN4Q6ZMN7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDZRN4Q6ZMN7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDZRN4Q6ZMN7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDZRN4Q6ZMN7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDZRN4Q6ZMN7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN4Q6ZMN7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.85■□□□□ 0.93
PDZRN4Q6ZMN7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN4Q6ZMN7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN4Q6ZMN7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN4Q6ZMN7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN4Q6ZMN7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
PDZRN4Q6ZMN7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.85■□□□□ 0.93
PDZRN4Q6ZMN7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN4Q6ZMN7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN4Q6ZMN7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN4Q6ZMN7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN4Q6ZMN7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PDZRN4Q6ZMN7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PDZRN4Q6ZMN7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.85■□□□□ 0.93
PDZRN4Q6ZMN7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
PDZRN4Q6ZMN7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
PDZRN4Q6ZMN7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.85■□□□□ 0.93
PDZRN4Q6ZMN7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.85■□□□□ 0.93
PDZRN4Q6ZMN7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN4Q6ZMN7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN4Q6ZMN7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.85■□□□□ 0.93
PDZRN4Q6ZMN7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC20.85■□□□□ 0.93
PDZRN4Q6ZMN7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.85■□□□□ 0.93
PDZRN4Q6ZMN7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN4Q6ZMN7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN4Q6ZMN7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN4Q6ZMN7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN4Q6ZMN7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN4Q6ZMN7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN4Q6ZMN7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN4Q6ZMN7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN4Q6ZMN7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDZRN4Q6ZMN7 KRT18P22-201ENST00000402024 1347 ntBASIC20.84■□□□□ 0.93
PDZRN4Q6ZMN7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
PDZRN4Q6ZMN7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.84■□□□□ 0.93
PDZRN4Q6ZMN7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
PDZRN4Q6ZMN7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.84■□□□□ 0.93
PDZRN4Q6ZMN7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.84■□□□□ 0.93
PDZRN4Q6ZMN7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.84■□□□□ 0.93
PDZRN4Q6ZMN7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PDZRN4Q6ZMN7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDZRN4Q6ZMN7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDZRN4Q6ZMN7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDZRN4Q6ZMN7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PDZRN4Q6ZMN7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
PDZRN4Q6ZMN7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDZRN4Q6ZMN7 TMPOP1-202ENST00000424642 1267 ntBASIC20.84■□□□□ 0.93
PDZRN4Q6ZMN7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.84■□□□□ 0.93
PDZRN4Q6ZMN7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.84■□□□□ 0.93
PDZRN4Q6ZMN7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.84■□□□□ 0.93
PDZRN4Q6ZMN7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDZRN4Q6ZMN7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PDZRN4Q6ZMN7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDZRN4Q6ZMN7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.84■□□□□ 0.93
PDZRN4Q6ZMN7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDZRN4Q6ZMN7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.84■□□□□ 0.93
PDZRN4Q6ZMN7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PDZRN4Q6ZMN7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PDZRN4Q6ZMN7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
PDZRN4Q6ZMN7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDZRN4Q6ZMN7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms