Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
CTR9Q6PD62 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CTR9Q6PD62 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CTR9Q6PD62 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CTR9Q6PD62 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTR9Q6PD62 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTR9Q6PD62 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CTR9Q6PD62 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.47■■□□□ 1.03
CTR9Q6PD62 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.47■■□□□ 1.03
CTR9Q6PD62 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC21.47■■□□□ 1.03
CTR9Q6PD62 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CTR9Q6PD62 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CTR9Q6PD62 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
CTR9Q6PD62 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC21.47■■□□□ 1.03
CTR9Q6PD62 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTR9Q6PD62 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
CTR9Q6PD62 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.47■■□□□ 1.03
CTR9Q6PD62 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.47■■□□□ 1.03
CTR9Q6PD62 KRT18P65-201ENST00000439811 1286 ntBASIC21.47■■□□□ 1.03
CTR9Q6PD62 MTCL1P1-201ENST00000446207 792 ntBASIC21.47■■□□□ 1.03
CTR9Q6PD62 FOSL1P1-201ENST00000511041 816 ntBASIC21.47■■□□□ 1.03
CTR9Q6PD62 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.47■■□□□ 1.03
CTR9Q6PD62 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.47■■□□□ 1.03
CTR9Q6PD62 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC21.47■■□□□ 1.03
CTR9Q6PD62 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTR9Q6PD62 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CTR9Q6PD62 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTR9Q6PD62 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CTR9Q6PD62 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTR9Q6PD62 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.46■■□□□ 1.03
CTR9Q6PD62 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTR9Q6PD62 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CTR9Q6PD62 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTR9Q6PD62 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.46■■□□□ 1.03
CTR9Q6PD62 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTR9Q6PD62 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC21.46■■□□□ 1.03
CTR9Q6PD62 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.46■■□□□ 1.03
CTR9Q6PD62 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
CTR9Q6PD62 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTR9Q6PD62 NSUN5P1-202ENST00000421140 1535 ntBASIC21.46■■□□□ 1.03
CTR9Q6PD62 NSUN5P2-203ENST00000457352 1529 ntBASIC21.46■■□□□ 1.03
CTR9Q6PD62 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTR9Q6PD62 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTR9Q6PD62 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CTR9Q6PD62 AC093677.2-201ENST00000600169 1863 ntBASIC21.46■■□□□ 1.03
CTR9Q6PD62 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTR9Q6PD62 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CTR9Q6PD62 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC21.46■■□□□ 1.03
CTR9Q6PD62 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.46■■□□□ 1.03
CTR9Q6PD62 UNC93B7-201ENST00000509439 705 ntBASIC21.46■■□□□ 1.03
CTR9Q6PD62 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.46■■□□□ 1.03
CTR9Q6PD62 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.46■■□□□ 1.03
CTR9Q6PD62 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CTR9Q6PD62 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTR9Q6PD62 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTR9Q6PD62 AC093010.1-201ENST00000473625 1624 ntBASIC21.46■■□□□ 1.03
CTR9Q6PD62 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTR9Q6PD62 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTR9Q6PD62 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTR9Q6PD62 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.45■■□□□ 1.02
CTR9Q6PD62 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTR9Q6PD62 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.45■■□□□ 1.02
CTR9Q6PD62 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTR9Q6PD62 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTR9Q6PD62 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTR9Q6PD62 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTR9Q6PD62 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
CTR9Q6PD62 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CTR9Q6PD62 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC21.45■■□□□ 1.02
CTR9Q6PD62 TSPY19P-201ENST00000418461 509 ntBASIC21.45■■□□□ 1.02
CTR9Q6PD62 TSPY18P-201ENST00000441642 509 ntBASIC21.45■■□□□ 1.02
CTR9Q6PD62 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CTR9Q6PD62 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CTR9Q6PD62 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.45■■□□□ 1.02
CTR9Q6PD62 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.45■■□□□ 1.02
CTR9Q6PD62 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.45■■□□□ 1.02
CTR9Q6PD62 AC005336.2-201ENST00000593183 939 ntBASIC21.45■■□□□ 1.02
CTR9Q6PD62 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.45■■□□□ 1.02
CTR9Q6PD62 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CTR9Q6PD62 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTR9Q6PD62 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.45■■□□□ 1.02
CTR9Q6PD62 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CTR9Q6PD62 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTR9Q6PD62 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CTR9Q6PD62 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTR9Q6PD62 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTR9Q6PD62 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
CTR9Q6PD62 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.45■■□□□ 1.02
CTR9Q6PD62 SP100-208ENST00000427101 1922 ntTSL 2 BASIC21.45■■□□□ 1.02
CTR9Q6PD62 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTR9Q6PD62 AC135776.1-201ENST00000319817 2481 ntBASIC21.45■■□□□ 1.02
CTR9Q6PD62 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.45■■□□□ 1.02
CTR9Q6PD62 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTR9Q6PD62 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CTR9Q6PD62 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTR9Q6PD62 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTR9Q6PD62 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTR9Q6PD62 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CTR9Q6PD62 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.44■■□□□ 1.02
CTR9Q6PD62 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms