Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 HLA-A-209ENST00000638375 975 ntBASIC17.1■□□□□ 0.33
LPCAT4Q643R3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 KRT8P3-201ENST00000519669 1449 ntBASIC17.1■□□□□ 0.33
LPCAT4Q643R3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
LPCAT4Q643R3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LPCAT4Q643R3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LPCAT4Q643R3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LPCAT4Q643R3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LPCAT4Q643R3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LPCAT4Q643R3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
LPCAT4Q643R3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LPCAT4Q643R3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
LPCAT4Q643R3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LPCAT4Q643R3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LPCAT4Q643R3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LPCAT4Q643R3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LPCAT4Q643R3 AC231657.2-201ENST00000624556 255 ntBASIC17.09■□□□□ 0.33
LPCAT4Q643R3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.09■□□□□ 0.33
LPCAT4Q643R3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.09■□□□□ 0.33
LPCAT4Q643R3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LPCAT4Q643R3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.09■□□□□ 0.33
LPCAT4Q643R3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LPCAT4Q643R3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.09■□□□□ 0.33
LPCAT4Q643R3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LPCAT4Q643R3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LPCAT4Q643R3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LPCAT4Q643R3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LPCAT4Q643R3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LPCAT4Q643R3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LPCAT4Q643R3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LPCAT4Q643R3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LPCAT4Q643R3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.08■□□□□ 0.33
LPCAT4Q643R3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.08■□□□□ 0.33
LPCAT4Q643R3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LPCAT4Q643R3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
LPCAT4Q643R3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.08■□□□□ 0.33
LPCAT4Q643R3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.08■□□□□ 0.33
LPCAT4Q643R3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
LPCAT4Q643R3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LPCAT4Q643R3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.08■□□□□ 0.33
LPCAT4Q643R3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LPCAT4Q643R3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LPCAT4Q643R3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.08■□□□□ 0.32
LPCAT4Q643R3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.08■□□□□ 0.32
LPCAT4Q643R3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LPCAT4Q643R3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.08■□□□□ 0.32
LPCAT4Q643R3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LPCAT4Q643R3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.08■□□□□ 0.32
LPCAT4Q643R3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.08■□□□□ 0.32
LPCAT4Q643R3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.08■□□□□ 0.32
LPCAT4Q643R3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.08■□□□□ 0.32
LPCAT4Q643R3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.08■□□□□ 0.32
LPCAT4Q643R3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.08■□□□□ 0.32
LPCAT4Q643R3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
LPCAT4Q643R3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.08■□□□□ 0.32
LPCAT4Q643R3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.08■□□□□ 0.32
LPCAT4Q643R3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.08■□□□□ 0.32
LPCAT4Q643R3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.08■□□□□ 0.32
LPCAT4Q643R3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
LPCAT4Q643R3 AC087623.3-201ENST00000607047 1098 ntBASIC17.08■□□□□ 0.32
LPCAT4Q643R3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
LPCAT4Q643R3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LPCAT4Q643R3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
LPCAT4Q643R3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.08■□□□□ 0.32
LPCAT4Q643R3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LPCAT4Q643R3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LPCAT4Q643R3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms