Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 AL024508.2-201ENST00000607749 1894 ntBASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HERC4Q5GLZ8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HERC4Q5GLZ8 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HERC4Q5GLZ8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.25■□□□□ 0.83
HERC4Q5GLZ8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
HERC4Q5GLZ8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.25■□□□□ 0.83
HERC4Q5GLZ8 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HERC4Q5GLZ8 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.25■□□□□ 0.83
HERC4Q5GLZ8 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.25■□□□□ 0.83
HERC4Q5GLZ8 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
HERC4Q5GLZ8 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.25■□□□□ 0.83
HERC4Q5GLZ8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
HERC4Q5GLZ8 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
HERC4Q5GLZ8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HERC4Q5GLZ8 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HERC4Q5GLZ8 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HERC4Q5GLZ8 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HERC4Q5GLZ8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.25■□□□□ 0.83
HERC4Q5GLZ8 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HERC4Q5GLZ8 RASA4DP-201ENST00000460726 1199 ntBASIC20.25■□□□□ 0.83
HERC4Q5GLZ8 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HERC4Q5GLZ8 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.25■□□□□ 0.83
HERC4Q5GLZ8 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
HERC4Q5GLZ8 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.25■□□□□ 0.83
HERC4Q5GLZ8 REXO1L9P-201ENST00000604264 2108 ntBASIC20.25■□□□□ 0.83
HERC4Q5GLZ8 AC004263.2-201ENST00000617183 678 ntBASIC20.25■□□□□ 0.83
HERC4Q5GLZ8 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HERC4Q5GLZ8 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HERC4Q5GLZ8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
HERC4Q5GLZ8 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HERC4Q5GLZ8 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HERC4Q5GLZ8 AC018470.1-201ENST00000624790 3129 ntBASIC20.25■□□□□ 0.83
HERC4Q5GLZ8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HERC4Q5GLZ8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.24■□□□□ 0.83
HERC4Q5GLZ8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HERC4Q5GLZ8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HERC4Q5GLZ8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.24■□□□□ 0.83
HERC4Q5GLZ8 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HERC4Q5GLZ8 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HERC4Q5GLZ8 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.24■□□□□ 0.83
HERC4Q5GLZ8 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HERC4Q5GLZ8 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HERC4Q5GLZ8 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HERC4Q5GLZ8 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.24■□□□□ 0.83
HERC4Q5GLZ8 KRT18P38-201ENST00000449496 1282 ntBASIC20.24■□□□□ 0.83
HERC4Q5GLZ8 KRT17P6-201ENST00000453795 1220 ntBASIC20.24■□□□□ 0.83
HERC4Q5GLZ8 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.24■□□□□ 0.83
HERC4Q5GLZ8 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.24■□□□□ 0.83
HERC4Q5GLZ8 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HERC4Q5GLZ8 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HERC4Q5GLZ8 AL096828.2-201ENST00000567259 1965 ntBASIC20.24■□□□□ 0.83
HERC4Q5GLZ8 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HERC4Q5GLZ8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.24■□□□□ 0.83
HERC4Q5GLZ8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HERC4Q5GLZ8 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
HERC4Q5GLZ8 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HERC4Q5GLZ8 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HERC4Q5GLZ8 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HERC4Q5GLZ8 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
HERC4Q5GLZ8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.24■□□□□ 0.83
HERC4Q5GLZ8 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
HERC4Q5GLZ8 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HERC4Q5GLZ8 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms