Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX4Q33E94 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RFX4Q33E94 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX4Q33E94 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.89■□□□□ 0.29
RFX4Q33E94 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX4Q33E94 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX4Q33E94 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
RFX4Q33E94 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX4Q33E94 AP001094.4-201ENST00000579008 2176 ntBASIC16.88■□□□□ 0.29
RFX4Q33E94 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.88■□□□□ 0.29
RFX4Q33E94 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.88■□□□□ 0.29
RFX4Q33E94 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
RFX4Q33E94 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX4Q33E94 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX4Q33E94 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFX4Q33E94 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.88■□□□□ 0.29
RFX4Q33E94 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
RFX4Q33E94 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.88■□□□□ 0.29
RFX4Q33E94 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RFX4Q33E94 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.88■□□□□ 0.29
RFX4Q33E94 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.88■□□□□ 0.29
RFX4Q33E94 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
RFX4Q33E94 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX4Q33E94 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX4Q33E94 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.88■□□□□ 0.29
RFX4Q33E94 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RFX4Q33E94 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.88■□□□□ 0.29
RFX4Q33E94 LINC00602-201ENST00000629776 2065 ntBASIC16.88■□□□□ 0.29
RFX4Q33E94 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX4Q33E94 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX4Q33E94 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RFX4Q33E94 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX4Q33E94 TNRC18P3-201ENST00000441896 2691 ntBASIC16.88■□□□□ 0.29
RFX4Q33E94 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RFX4Q33E94 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.88■□□□□ 0.29
RFX4Q33E94 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX4Q33E94 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFX4Q33E94 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX4Q33E94 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFX4Q33E94 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.87■□□□□ 0.29
RFX4Q33E94 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX4Q33E94 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX4Q33E94 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX4Q33E94 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.87■□□□□ 0.29
RFX4Q33E94 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX4Q33E94 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX4Q33E94 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX4Q33E94 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX4Q33E94 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RFX4Q33E94 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.87■□□□□ 0.29
RFX4Q33E94 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.87■□□□□ 0.29
RFX4Q33E94 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX4Q33E94 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.87■□□□□ 0.29
RFX4Q33E94 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.87■□□□□ 0.29
RFX4Q33E94 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.87■□□□□ 0.29
RFX4Q33E94 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RFX4Q33E94 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
RFX4Q33E94 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX4Q33E94 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.87■□□□□ 0.29
RFX4Q33E94 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.87■□□□□ 0.29
RFX4Q33E94 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.87■□□□□ 0.29
RFX4Q33E94 AC073648.6-201ENST00000641589 218 ntBASIC16.87■□□□□ 0.29
RFX4Q33E94 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX4Q33E94 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFX4Q33E94 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX4Q33E94 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
RFX4Q33E94 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX4Q33E94 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFX4Q33E94 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RFX4Q33E94 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.87■□□□□ 0.29
RFX4Q33E94 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
RFX4Q33E94 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
RFX4Q33E94 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.87■□□□□ 0.29
RFX4Q33E94 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX4Q33E94 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX4Q33E94 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFX4Q33E94 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFX4Q33E94 NKILA-202ENST00000614771 2598 ntBASIC16.86■□□□□ 0.29
RFX4Q33E94 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFX4Q33E94 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFX4Q33E94 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFX4Q33E94 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFX4Q33E94 AC106820.2-201ENST00000563775 3264 ntBASIC16.86■□□□□ 0.29
RFX4Q33E94 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFX4Q33E94 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.86■□□□□ 0.29
RFX4Q33E94 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RFX4Q33E94 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.86■□□□□ 0.29
RFX4Q33E94 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFX4Q33E94 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFX4Q33E94 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFX4Q33E94 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.86■□□□□ 0.29
RFX4Q33E94 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.86■□□□□ 0.29
RFX4Q33E94 AL353807.1-201ENST00000427475 662 ntBASIC16.86■□□□□ 0.29
RFX4Q33E94 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RFX4Q33E94 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
RFX4Q33E94 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RFX4Q33E94 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.86■□□□□ 0.29
RFX4Q33E94 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.86■□□□□ 0.29
RFX4Q33E94 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFX4Q33E94 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms