Protein–RNA interactions for Protein: Q02742

GCNT1, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT1Q02742 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GCNT1Q02742 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GCNT1Q02742 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GCNT1Q02742 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
GCNT1Q02742 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.36■□□□□ 0.69
GCNT1Q02742 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
GCNT1Q02742 AC022898.2-201ENST00000616822 1312 ntBASIC19.36■□□□□ 0.69
GCNT1Q02742 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.36■□□□□ 0.69
GCNT1Q02742 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GCNT1Q02742 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GCNT1Q02742 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GCNT1Q02742 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GCNT1Q02742 IGHGP-201ENST00000390555 1178 ntBASIC19.36■□□□□ 0.69
GCNT1Q02742 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
GCNT1Q02742 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.36■□□□□ 0.69
GCNT1Q02742 SPDYE13P-201ENST00000445314 798 ntBASIC19.36■□□□□ 0.69
GCNT1Q02742 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.36■□□□□ 0.69
GCNT1Q02742 ZNF444P1-201ENST00000559497 298 ntBASIC19.36■□□□□ 0.69
GCNT1Q02742 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.36■□□□□ 0.69
GCNT1Q02742 AC083849.1-201ENST00000615227 514 ntBASIC19.36■□□□□ 0.69
GCNT1Q02742 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GCNT1Q02742 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.36■□□□□ 0.69
GCNT1Q02742 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GCNT1Q02742 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.36■□□□□ 0.69
GCNT1Q02742 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GCNT1Q02742 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GCNT1Q02742 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.35■□□□□ 0.69
GCNT1Q02742 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GCNT1Q02742 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
GCNT1Q02742 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
GCNT1Q02742 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.35■□□□□ 0.69
GCNT1Q02742 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GCNT1Q02742 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GCNT1Q02742 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.35■□□□□ 0.69
GCNT1Q02742 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GCNT1Q02742 AP003733.1-201ENST00000491725 852 ntBASIC19.35■□□□□ 0.69
GCNT1Q02742 KRT18P21-201ENST00000515767 1272 ntBASIC19.35■□□□□ 0.69
GCNT1Q02742 VENTXP5-201ENST00000523979 775 ntBASIC19.35■□□□□ 0.69
GCNT1Q02742 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.35■□□□□ 0.69
GCNT1Q02742 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.35■□□□□ 0.69
GCNT1Q02742 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.35■□□□□ 0.69
GCNT1Q02742 AC004263.2-201ENST00000617183 678 ntBASIC19.35■□□□□ 0.69
GCNT1Q02742 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.35■□□□□ 0.69
GCNT1Q02742 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GCNT1Q02742 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
GCNT1Q02742 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
GCNT1Q02742 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GCNT1Q02742 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GCNT1Q02742 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GCNT1Q02742 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.35■□□□□ 0.69
GCNT1Q02742 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GCNT1Q02742 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GCNT1Q02742 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
GCNT1Q02742 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
GCNT1Q02742 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GCNT1Q02742 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
GCNT1Q02742 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
GCNT1Q02742 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.34■□□□□ 0.69
GCNT1Q02742 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.34■□□□□ 0.69
GCNT1Q02742 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
GCNT1Q02742 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
GCNT1Q02742 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GCNT1Q02742 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.34■□□□□ 0.69
GCNT1Q02742 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.34■□□□□ 0.69
GCNT1Q02742 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.34■□□□□ 0.69
GCNT1Q02742 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.34■□□□□ 0.69
GCNT1Q02742 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.34■□□□□ 0.69
GCNT1Q02742 FAM210CP-201ENST00000445714 574 ntBASIC19.34■□□□□ 0.69
GCNT1Q02742 AL671277.2-201ENST00000458060 996 ntBASIC19.34■□□□□ 0.69
GCNT1Q02742 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.34■□□□□ 0.69
GCNT1Q02742 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.34■□□□□ 0.69
GCNT1Q02742 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.34■□□□□ 0.69
GCNT1Q02742 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.34■□□□□ 0.69
GCNT1Q02742 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.34■□□□□ 0.69
GCNT1Q02742 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
GCNT1Q02742 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
GCNT1Q02742 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
GCNT1Q02742 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
GCNT1Q02742 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
GCNT1Q02742 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.34■□□□□ 0.69
GCNT1Q02742 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.34■□□□□ 0.69
GCNT1Q02742 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GCNT1Q02742 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.34■□□□□ 0.69
GCNT1Q02742 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
GCNT1Q02742 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GCNT1Q02742 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.69
GCNT1Q02742 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.33■□□□□ 0.69
GCNT1Q02742 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GCNT1Q02742 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.33■□□□□ 0.69
GCNT1Q02742 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GCNT1Q02742 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
GCNT1Q02742 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.33■□□□□ 0.69
GCNT1Q02742 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
GCNT1Q02742 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GCNT1Q02742 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.33■□□□□ 0.68
GCNT1Q02742 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.33■□□□□ 0.68
GCNT1Q02742 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.33■□□□□ 0.68
GCNT1Q02742 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.33■□□□□ 0.68
GCNT1Q02742 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
GCNT1Q02742 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms