Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.89■□□□□ 0.93
HTRA3P83110 FAM58DP-201ENST00000428076 619 ntBASIC20.89■□□□□ 0.93
HTRA3P83110 COQ6-210ENST00000554920 649 ntTSL 3 BASIC20.89■□□□□ 0.93
HTRA3P83110 AL353135.1-201ENST00000606729 504 ntBASIC20.89■□□□□ 0.93
HTRA3P83110 AC007064.4-201ENST00000637740 555 ntBASIC20.89■□□□□ 0.93
HTRA3P83110 AC068587.9-201ENST00000641814 219 ntBASIC20.89■□□□□ 0.93
HTRA3P83110 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HTRA3P83110 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HTRA3P83110 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HTRA3P83110 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HTRA3P83110 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
HTRA3P83110 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
HTRA3P83110 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HTRA3P83110 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HTRA3P83110 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.88■□□□□ 0.93
HTRA3P83110 PIN1P1-201ENST00000412108 996 ntBASIC20.88■□□□□ 0.93
HTRA3P83110 GATB-205ENST00000508611 605 ntTSL 2 BASIC20.88■□□□□ 0.93
HTRA3P83110 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HTRA3P83110 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HTRA3P83110 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC20.88■□□□□ 0.93
HTRA3P83110 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC20.88■□□□□ 0.93
HTRA3P83110 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HTRA3P83110 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.88■□□□□ 0.93
HTRA3P83110 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC20.88■□□□□ 0.93
HTRA3P83110 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC20.88■□□□□ 0.93
HTRA3P83110 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HTRA3P83110 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
HTRA3P83110 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HTRA3P83110 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
HTRA3P83110 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HTRA3P83110 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
HTRA3P83110 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HTRA3P83110 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HTRA3P83110 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.87■□□□□ 0.93
HTRA3P83110 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HTRA3P83110 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
HTRA3P83110 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HTRA3P83110 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
HTRA3P83110 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HTRA3P83110 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC20.87■□□□□ 0.93
HTRA3P83110 MIR1909-201ENST00000411312 80 ntBASIC20.87■□□□□ 0.93
HTRA3P83110 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC20.87■□□□□ 0.93
HTRA3P83110 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.87■□□□□ 0.93
HTRA3P83110 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HTRA3P83110 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.87■□□□□ 0.93
HTRA3P83110 KRT8P48-201ENST00000515599 1220 ntBASIC20.87■□□□□ 0.93
HTRA3P83110 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HTRA3P83110 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC20.87■□□□□ 0.93
HTRA3P83110 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC20.87■□□□□ 0.93
HTRA3P83110 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.87■□□□□ 0.93
HTRA3P83110 AC008687.5-201ENST00000593746 558 ntBASIC20.87■□□□□ 0.93
HTRA3P83110 AD001527.2-201ENST00000622994 785 ntBASIC20.87■□□□□ 0.93
HTRA3P83110 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.87■□□□□ 0.93
HTRA3P83110 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
HTRA3P83110 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
HTRA3P83110 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HTRA3P83110 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HTRA3P83110 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HTRA3P83110 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HTRA3P83110 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
HTRA3P83110 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HTRA3P83110 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
HTRA3P83110 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.86■□□□□ 0.93
HTRA3P83110 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.86■□□□□ 0.93
HTRA3P83110 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HTRA3P83110 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC20.86■□□□□ 0.93
HTRA3P83110 AC069335.1-201ENST00000489972 472 ntBASIC20.86■□□□□ 0.93
HTRA3P83110 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC20.86■□□□□ 0.93
HTRA3P83110 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC20.86■□□□□ 0.93
HTRA3P83110 AC112698.1-201ENST00000510299 916 ntBASIC20.86■□□□□ 0.93
HTRA3P83110 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC20.86■□□□□ 0.93
HTRA3P83110 BAD-207ENST00000544785 525 ntTSL 3 BASIC20.86■□□□□ 0.93
HTRA3P83110 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
HTRA3P83110 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.86■□□□□ 0.93
HTRA3P83110 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HTRA3P83110 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HTRA3P83110 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HTRA3P83110 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HTRA3P83110 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HTRA3P83110 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HTRA3P83110 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
HTRA3P83110 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HTRA3P83110 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HTRA3P83110 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HTRA3P83110 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HTRA3P83110 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HTRA3P83110 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.85■□□□□ 0.93
HTRA3P83110 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
HTRA3P83110 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HTRA3P83110 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HTRA3P83110 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.85■□□□□ 0.93
HTRA3P83110 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC20.85■□□□□ 0.93
HTRA3P83110 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.85■□□□□ 0.93
HTRA3P83110 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC20.85■□□□□ 0.93
HTRA3P83110 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HTRA3P83110 AC092658.1-201ENST00000505836 891 ntBASIC20.85■□□□□ 0.93
HTRA3P83110 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC20.85■□□□□ 0.93
HTRA3P83110 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.85■□□□□ 0.93
HTRA3P83110 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
HTRA3P83110 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms