Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
PCP4P48539 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCP4P48539 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCP4P48539 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCP4P48539 AC097637.2-201ENST00000624096 1997 ntBASIC12.45□□□□□ -0.42
PCP4P48539 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
PCP4P48539 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCP4P48539 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCP4P48539 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PCP4P48539 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PCP4P48539 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
PCP4P48539 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
PCP4P48539 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC12.44□□□□□ -0.42
PCP4P48539 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
PCP4P48539 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PCP4P48539 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC12.44□□□□□ -0.42
PCP4P48539 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC12.44□□□□□ -0.42
PCP4P48539 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
PCP4P48539 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
PCP4P48539 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC12.44□□□□□ -0.42
PCP4P48539 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
PCP4P48539 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
PCP4P48539 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PCP4P48539 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
PCP4P48539 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PCP4P48539 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PCP4P48539 CES1P1-201ENST00000421606 1704 ntBASIC12.44□□□□□ -0.42
PCP4P48539 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
PCP4P48539 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
PCP4P48539 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
PCP4P48539 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
PCP4P48539 OS9-205ENST00000413095 1660 ntTSL 2 BASIC12.44□□□□□ -0.42
PCP4P48539 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.44□□□□□ -0.42
PCP4P48539 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
PCP4P48539 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.44□□□□□ -0.42
PCP4P48539 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PCP4P48539 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
PCP4P48539 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC12.44□□□□□ -0.42
PCP4P48539 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC12.44□□□□□ -0.42
PCP4P48539 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PCP4P48539 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PCP4P48539 TMEM179-206ENST00000616017 1645 ntBASIC12.44□□□□□ -0.42
PCP4P48539 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PCP4P48539 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC12.44□□□□□ -0.42
PCP4P48539 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCP4P48539 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCP4P48539 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
PCP4P48539 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCP4P48539 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC12.43□□□□□ -0.42
PCP4P48539 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PCP4P48539 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCP4P48539 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
PCP4P48539 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.43□□□□□ -0.42
PCP4P48539 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCP4P48539 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
PCP4P48539 C17orf82-201ENST00000623772 1530 ntBASIC12.43□□□□□ -0.42
PCP4P48539 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
PCP4P48539 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCP4P48539 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCP4P48539 AC092053.1-201ENST00000605787 1936 ntBASIC12.43□□□□□ -0.42
PCP4P48539 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PCP4P48539 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCP4P48539 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.43□□□□□ -0.42
PCP4P48539 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCP4P48539 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCP4P48539 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.43□□□□□ -0.42
PCP4P48539 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.43□□□□□ -0.42
PCP4P48539 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCP4P48539 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PCP4P48539 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCP4P48539 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.43□□□□□ -0.42
PCP4P48539 AC135983.2-203ENST00000454486 1613 ntBASIC12.43□□□□□ -0.42
PCP4P48539 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCP4P48539 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC12.43□□□□□ -0.42
PCP4P48539 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.43□□□□□ -0.42
PCP4P48539 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
PCP4P48539 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCP4P48539 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCP4P48539 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
PCP4P48539 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCP4P48539 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCP4P48539 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
PCP4P48539 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC12.43□□□□□ -0.42
PCP4P48539 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCP4P48539 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.43□□□□□ -0.42
PCP4P48539 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCP4P48539 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
PCP4P48539 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
PCP4P48539 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCP4P48539 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCP4P48539 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCP4P48539 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCP4P48539 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCP4P48539 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
PCP4P48539 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
PCP4P48539 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PCP4P48539 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.42□□□□□ -0.42
PCP4P48539 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCP4P48539 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.42□□□□□ -0.42
PCP4P48539 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms