Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC3P40938 AC112777.1-201ENST00000540175 1423 ntBASIC16.59■□□□□ 0.25
RFC3P40938 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC3P40938 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RFC3P40938 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC3P40938 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC3P40938 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC3P40938 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC3P40938 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.59■□□□□ 0.25
RFC3P40938 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RFC3P40938 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.59■□□□□ 0.25
RFC3P40938 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.59■□□□□ 0.25
RFC3P40938 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC3P40938 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RFC3P40938 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
RFC3P40938 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RFC3P40938 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFC3P40938 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
RFC3P40938 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.58■□□□□ 0.24
RFC3P40938 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.58■□□□□ 0.24
RFC3P40938 NUS1P1-201ENST00000446295 882 ntBASIC16.58■□□□□ 0.24
RFC3P40938 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.58■□□□□ 0.24
RFC3P40938 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.58■□□□□ 0.24
RFC3P40938 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.58■□□□□ 0.24
RFC3P40938 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.58■□□□□ 0.24
RFC3P40938 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.58■□□□□ 0.24
RFC3P40938 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFC3P40938 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.58■□□□□ 0.24
RFC3P40938 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.58■□□□□ 0.24
RFC3P40938 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFC3P40938 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
RFC3P40938 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.58■□□□□ 0.24
RFC3P40938 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFC3P40938 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RFC3P40938 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFC3P40938 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.58■□□□□ 0.24
RFC3P40938 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.58■□□□□ 0.24
RFC3P40938 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC3P40938 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.57■□□□□ 0.24
RFC3P40938 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.57■□□□□ 0.24
RFC3P40938 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
RFC3P40938 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC3P40938 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFC3P40938 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC3P40938 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC3P40938 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC3P40938 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.57■□□□□ 0.24
RFC3P40938 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFC3P40938 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
RFC3P40938 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.57■□□□□ 0.24
RFC3P40938 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.57■□□□□ 0.24
RFC3P40938 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.57■□□□□ 0.24
RFC3P40938 AC246785.2-201ENST00000432512 513 ntBASIC16.57■□□□□ 0.24
RFC3P40938 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.57■□□□□ 0.24
RFC3P40938 AC091304.2-201ENST00000564639 760 ntBASIC16.57■□□□□ 0.24
RFC3P40938 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.57■□□□□ 0.24
RFC3P40938 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.57■□□□□ 0.24
RFC3P40938 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.57■□□□□ 0.24
RFC3P40938 AP005901.3-202ENST00000581653 237 ntBASIC16.57■□□□□ 0.24
RFC3P40938 Z69720.1-201ENST00000601483 472 ntBASIC16.57■□□□□ 0.24
RFC3P40938 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.57■□□□□ 0.24
RFC3P40938 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.57■□□□□ 0.24
RFC3P40938 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC3P40938 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.57■□□□□ 0.24
RFC3P40938 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
RFC3P40938 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC3P40938 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC3P40938 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.56■□□□□ 0.24
RFC3P40938 AL024508.2-201ENST00000607749 1894 ntBASIC16.56■□□□□ 0.24
RFC3P40938 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFC3P40938 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFC3P40938 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RFC3P40938 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFC3P40938 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFC3P40938 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
RFC3P40938 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RFC3P40938 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.56■□□□□ 0.24
RFC3P40938 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.56■□□□□ 0.24
RFC3P40938 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
RFC3P40938 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFC3P40938 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RFC3P40938 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.56■□□□□ 0.24
RFC3P40938 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
RFC3P40938 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFC3P40938 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFC3P40938 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFC3P40938 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFC3P40938 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.56■□□□□ 0.24
RFC3P40938 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
RFC3P40938 KRT17P6-201ENST00000453795 1220 ntBASIC16.56■□□□□ 0.24
RFC3P40938 EMBP1-201ENST00000458200 901 ntBASIC16.56■□□□□ 0.24
RFC3P40938 RN7SL606P-201ENST00000472779 293 ntBASIC16.56■□□□□ 0.24
RFC3P40938 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFC3P40938 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.56■□□□□ 0.24
RFC3P40938 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.56■□□□□ 0.24
RFC3P40938 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.56■□□□□ 0.24
RFC3P40938 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.56■□□□□ 0.24
RFC3P40938 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.56■□□□□ 0.24
RFC3P40938 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFC3P40938 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms