Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RFX1P22670 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RFX1P22670 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.75■□□□□ 0.75
RFX1P22670 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.74■□□□□ 0.75
RFX1P22670 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFX1P22670 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RFX1P22670 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX1P22670 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.74■□□□□ 0.75
RFX1P22670 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFX1P22670 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFX1P22670 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.74■□□□□ 0.75
RFX1P22670 AL096828.2-201ENST00000567259 1965 ntBASIC19.74■□□□□ 0.75
RFX1P22670 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFX1P22670 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFX1P22670 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX1P22670 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.74■□□□□ 0.75
RFX1P22670 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX1P22670 AC004870.1-201ENST00000315132 882 ntBASIC19.74■□□□□ 0.75
RFX1P22670 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX1P22670 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.74■□□□□ 0.75
RFX1P22670 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.74■□□□□ 0.75
RFX1P22670 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.74■□□□□ 0.75
RFX1P22670 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.74■□□□□ 0.75
RFX1P22670 AC111152.3-201ENST00000569699 673 ntBASIC19.74■□□□□ 0.75
RFX1P22670 AC092119.3-201ENST00000612618 583 ntBASIC19.74■□□□□ 0.75
RFX1P22670 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RFX1P22670 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.74■□□□□ 0.75
RFX1P22670 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.74■□□□□ 0.75
RFX1P22670 PHGDH-209ENST00000641074 1780 ntBASIC19.74■□□□□ 0.75
RFX1P22670 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.74■□□□□ 0.75
RFX1P22670 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX1P22670 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RFX1P22670 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFX1P22670 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.74■□□□□ 0.75
RFX1P22670 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX1P22670 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX1P22670 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFX1P22670 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFX1P22670 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX1P22670 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFX1P22670 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX1P22670 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.73■□□□□ 0.75
RFX1P22670 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFX1P22670 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFX1P22670 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.73■□□□□ 0.75
RFX1P22670 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFX1P22670 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFX1P22670 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFX1P22670 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.73■□□□□ 0.75
RFX1P22670 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.73■□□□□ 0.75
RFX1P22670 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RFX1P22670 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.73■□□□□ 0.75
RFX1P22670 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RFX1P22670 AC008764.6-201ENST00000595909 2069 ntBASIC19.73■□□□□ 0.75
RFX1P22670 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFX1P22670 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RFX1P22670 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.73■□□□□ 0.75
RFX1P22670 ATP5G2P1-201ENST00000433580 426 ntBASIC19.73■□□□□ 0.75
RFX1P22670 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.73■□□□□ 0.75
RFX1P22670 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.73■□□□□ 0.75
RFX1P22670 NEK4P2-201ENST00000580004 1012 ntBASIC19.73■□□□□ 0.75
RFX1P22670 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.73■□□□□ 0.75
RFX1P22670 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
RFX1P22670 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RFX1P22670 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RFX1P22670 REXO1L9P-201ENST00000604264 2108 ntBASIC19.73■□□□□ 0.75
RFX1P22670 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
RFX1P22670 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
RFX1P22670 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFX1P22670 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RFX1P22670 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFX1P22670 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.73■□□□□ 0.75
RFX1P22670 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFX1P22670 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFX1P22670 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RFX1P22670 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.72■□□□□ 0.75
RFX1P22670 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFX1P22670 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.72■□□□□ 0.75
RFX1P22670 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFX1P22670 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RFX1P22670 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.72■□□□□ 0.75
RFX1P22670 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RFX1P22670 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RFX1P22670 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.72■□□□□ 0.75
RFX1P22670 AC010240.3-201ENST00000607688 395 ntBASIC19.72■□□□□ 0.75
RFX1P22670 AC083849.1-201ENST00000615227 514 ntBASIC19.72■□□□□ 0.75
RFX1P22670 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RFX1P22670 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RFX1P22670 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RFX1P22670 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFX1P22670 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFX1P22670 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.72■□□□□ 0.75
RFX1P22670 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.72■□□□□ 0.75
RFX1P22670 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFX1P22670 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFX1P22670 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX1P22670 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX1P22670 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.71■□□□□ 0.75
RFX1P22670 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX1P22670 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms