Protein–RNA interactions for Protein: P20248

CCNA2, Cyclin-A2, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2P20248 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CCNA2P20248 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.14■□□□□ 0.33
CCNA2P20248 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNA2P20248 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.14■□□□□ 0.33
CCNA2P20248 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNA2P20248 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCNA2P20248 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.13■□□□□ 0.33
CCNA2P20248 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CCNA2P20248 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCNA2P20248 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCNA2P20248 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.13■□□□□ 0.33
CCNA2P20248 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
CCNA2P20248 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.13■□□□□ 0.33
CCNA2P20248 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCNA2P20248 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCNA2P20248 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCNA2P20248 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCNA2P20248 MFAP1P1-201ENST00000442257 1255 ntBASIC17.13■□□□□ 0.33
CCNA2P20248 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCNA2P20248 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.13■□□□□ 0.33
CCNA2P20248 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.13■□□□□ 0.33
CCNA2P20248 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.13■□□□□ 0.33
CCNA2P20248 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.13■□□□□ 0.33
CCNA2P20248 MIR4785-201ENST00000585005 73 ntBASIC17.13■□□□□ 0.33
CCNA2P20248 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCNA2P20248 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCNA2P20248 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCNA2P20248 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCNA2P20248 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCNA2P20248 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCNA2P20248 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCNA2P20248 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.13■□□□□ 0.33
CCNA2P20248 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCNA2P20248 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.13■□□□□ 0.33
CCNA2P20248 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.13■□□□□ 0.33
CCNA2P20248 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCNA2P20248 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCNA2P20248 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
CCNA2P20248 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCNA2P20248 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.12■□□□□ 0.33
CCNA2P20248 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CCNA2P20248 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCNA2P20248 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.12■□□□□ 0.33
CCNA2P20248 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CCNA2P20248 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CCNA2P20248 AC011270.2-201ENST00000624293 2550 ntBASIC17.12■□□□□ 0.33
CCNA2P20248 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCNA2P20248 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCNA2P20248 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CCNA2P20248 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.12■□□□□ 0.33
CCNA2P20248 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCNA2P20248 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CCNA2P20248 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.12■□□□□ 0.33
CCNA2P20248 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.12■□□□□ 0.33
CCNA2P20248 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.12■□□□□ 0.33
CCNA2P20248 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.12■□□□□ 0.33
CCNA2P20248 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.12■□□□□ 0.33
CCNA2P20248 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.12■□□□□ 0.33
CCNA2P20248 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCNA2P20248 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCNA2P20248 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CCNA2P20248 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.12■□□□□ 0.33
CCNA2P20248 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
CCNA2P20248 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
CCNA2P20248 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCNA2P20248 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.12■□□□□ 0.33
CCNA2P20248 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.12■□□□□ 0.33
CCNA2P20248 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCNA2P20248 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCNA2P20248 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.11■□□□□ 0.33
CCNA2P20248 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCNA2P20248 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCNA2P20248 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCNA2P20248 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CCNA2P20248 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
CCNA2P20248 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CCNA2P20248 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.11■□□□□ 0.33
CCNA2P20248 AC046158.3-201ENST00000624947 2558 ntBASIC17.11■□□□□ 0.33
CCNA2P20248 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CCNA2P20248 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.11■□□□□ 0.33
CCNA2P20248 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCNA2P20248 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCNA2P20248 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCNA2P20248 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CCNA2P20248 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCNA2P20248 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCNA2P20248 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCNA2P20248 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
CCNA2P20248 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCNA2P20248 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCNA2P20248 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCNA2P20248 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCNA2P20248 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCNA2P20248 AP000525.1-201ENST00000608286 694 ntBASIC17.11■□□□□ 0.33
CCNA2P20248 AC066615.1-201ENST00000640911 628 ntBASIC17.11■□□□□ 0.33
CCNA2P20248 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.11■□□□□ 0.33
CCNA2P20248 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCNA2P20248 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCNA2P20248 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.11■□□□□ 0.33
CCNA2P20248 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms