Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PPP3CBP16298 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PPP3CBP16298 KRT18P56-201ENST00000507275 550 ntBASIC16.27■□□□□ 0.2
PPP3CBP16298 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.27■□□□□ 0.2
PPP3CBP16298 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.27■□□□□ 0.2
PPP3CBP16298 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PPP3CBP16298 AC104390.1-201ENST00000555663 520 ntBASIC16.27■□□□□ 0.2
PPP3CBP16298 AC009065.1-201ENST00000564055 1225 ntBASIC16.27■□□□□ 0.2
PPP3CBP16298 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.27■□□□□ 0.2
PPP3CBP16298 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PPP3CBP16298 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PPP3CBP16298 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PPP3CBP16298 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PPP3CBP16298 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PPP3CBP16298 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
PPP3CBP16298 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PPP3CBP16298 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
PPP3CBP16298 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.19
PPP3CBP16298 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PPP3CBP16298 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PPP3CBP16298 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PPP3CBP16298 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PPP3CBP16298 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.27■□□□□ 0.19
PPP3CBP16298 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
PPP3CBP16298 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PPP3CBP16298 AC034236.2-201ENST00000606662 1610 ntBASIC16.27■□□□□ 0.19
PPP3CBP16298 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
PPP3CBP16298 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PPP3CBP16298 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PPP3CBP16298 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PPP3CBP16298 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.26■□□□□ 0.19
PPP3CBP16298 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PPP3CBP16298 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PPP3CBP16298 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PPP3CBP16298 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PPP3CBP16298 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PPP3CBP16298 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PPP3CBP16298 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.26■□□□□ 0.19
PPP3CBP16298 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PPP3CBP16298 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.26■□□□□ 0.19
PPP3CBP16298 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.26■□□□□ 0.19
PPP3CBP16298 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.26■□□□□ 0.19
PPP3CBP16298 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PPP3CBP16298 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PPP3CBP16298 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PPP3CBP16298 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PPP3CBP16298 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
PPP3CBP16298 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PPP3CBP16298 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PPP3CBP16298 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PPP3CBP16298 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.26■□□□□ 0.19
PPP3CBP16298 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.26■□□□□ 0.19
PPP3CBP16298 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.26■□□□□ 0.19
PPP3CBP16298 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.26■□□□□ 0.19
PPP3CBP16298 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PPP3CBP16298 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.26■□□□□ 0.19
PPP3CBP16298 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
PPP3CBP16298 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.26■□□□□ 0.19
PPP3CBP16298 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.26■□□□□ 0.19
PPP3CBP16298 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PPP3CBP16298 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PPP3CBP16298 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.26■□□□□ 0.19
PPP3CBP16298 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PPP3CBP16298 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PPP3CBP16298 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PPP3CBP16298 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PPP3CBP16298 AL031598.1-201ENST00000561511 1773 ntBASIC16.26■□□□□ 0.19
PPP3CBP16298 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PPP3CBP16298 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.25■□□□□ 0.19
PPP3CBP16298 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.25■□□□□ 0.19
PPP3CBP16298 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PPP3CBP16298 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PPP3CBP16298 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PPP3CBP16298 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PPP3CBP16298 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
PPP3CBP16298 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PPP3CBP16298 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PPP3CBP16298 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PPP3CBP16298 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PPP3CBP16298 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PPP3CBP16298 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.25■□□□□ 0.19
PPP3CBP16298 AC008556.1-201ENST00000610908 2040 ntBASIC16.25■□□□□ 0.19
PPP3CBP16298 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PPP3CBP16298 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PPP3CBP16298 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
PPP3CBP16298 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PPP3CBP16298 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PPP3CBP16298 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PPP3CBP16298 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.25■□□□□ 0.19
PPP3CBP16298 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.25■□□□□ 0.19
PPP3CBP16298 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.25■□□□□ 0.19
PPP3CBP16298 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.25■□□□□ 0.19
PPP3CBP16298 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.25■□□□□ 0.19
PPP3CBP16298 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.25■□□□□ 0.19
PPP3CBP16298 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PPP3CBP16298 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PPP3CBP16298 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
PPP3CBP16298 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PPP3CBP16298 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PPP3CBP16298 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms