Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPRFP10586 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPRFP10586 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.69■□□□□ 0.9
PTPRFP10586 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.69■□□□□ 0.9
PTPRFP10586 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.69■□□□□ 0.9
PTPRFP10586 AL355385.1-201ENST00000606123 409 ntBASIC20.69■□□□□ 0.9
PTPRFP10586 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.69■□□□□ 0.9
PTPRFP10586 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPRFP10586 AC134684.3-201ENST00000641758 218 ntBASIC20.69■□□□□ 0.9
PTPRFP10586 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PTPRFP10586 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPRFP10586 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPRFP10586 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPRFP10586 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPRFP10586 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPRFP10586 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPRFP10586 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.69■□□□□ 0.9
PTPRFP10586 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPRFP10586 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PTPRFP10586 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.69■□□□□ 0.9
PTPRFP10586 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
PTPRFP10586 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PTPRFP10586 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
PTPRFP10586 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPRFP10586 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.68■□□□□ 0.9
PTPRFP10586 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.68■□□□□ 0.9
PTPRFP10586 AP006288.1-201ENST00000446065 395 ntBASIC20.68■□□□□ 0.9
PTPRFP10586 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC20.68■□□□□ 0.9
PTPRFP10586 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.68■□□□□ 0.9
PTPRFP10586 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.68■□□□□ 0.9
PTPRFP10586 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPRFP10586 AC116562.4-201ENST00000641316 2276 ntBASIC20.68■□□□□ 0.9
PTPRFP10586 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPRFP10586 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPRFP10586 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPRFP10586 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPRFP10586 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPRFP10586 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPRFP10586 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPRFP10586 AC027796.2-201ENST00000575326 344 ntBASIC20.68■□□□□ 0.9
PTPRFP10586 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PTPRFP10586 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPRFP10586 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTPRFP10586 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.68■□□□□ 0.9
PTPRFP10586 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPRFP10586 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPRFP10586 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.67■□□□□ 0.9
PTPRFP10586 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPRFP10586 AC004817.3-201ENST00000602957 2129 ntBASIC20.67■□□□□ 0.9
PTPRFP10586 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
PTPRFP10586 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPRFP10586 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPRFP10586 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPRFP10586 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTPRFP10586 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPRFP10586 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
PTPRFP10586 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTPRFP10586 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPRFP10586 AC018845.2-201ENST00000568326 409 ntBASIC20.67■□□□□ 0.9
PTPRFP10586 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.67■□□□□ 0.9
PTPRFP10586 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.67■□□□□ 0.9
PTPRFP10586 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
PTPRFP10586 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPRFP10586 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTPRFP10586 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPRFP10586 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.67■□□□□ 0.9
PTPRFP10586 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.67■□□□□ 0.9
PTPRFP10586 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPRFP10586 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTPRFP10586 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.66■□□□□ 0.9
PTPRFP10586 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.66■□□□□ 0.9
PTPRFP10586 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.66■□□□□ 0.9
PTPRFP10586 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.66■□□□□ 0.9
PTPRFP10586 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.66■□□□□ 0.9
PTPRFP10586 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.66■□□□□ 0.9
PTPRFP10586 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.66■□□□□ 0.9
PTPRFP10586 AC097374.2-201ENST00000618617 1306 ntBASIC20.66■□□□□ 0.9
PTPRFP10586 AL353593.2-201ENST00000602529 1483 ntBASIC20.66■□□□□ 0.9
PTPRFP10586 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTPRFP10586 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPRFP10586 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTPRFP10586 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.66■□□□□ 0.9
PTPRFP10586 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPRFP10586 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPRFP10586 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPRFP10586 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.66■□□□□ 0.9
PTPRFP10586 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC20.66■□□□□ 0.9
PTPRFP10586 METTL21AP1-201ENST00000438852 635 ntBASIC20.66■□□□□ 0.9
PTPRFP10586 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.66■□□□□ 0.9
PTPRFP10586 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.66■□□□□ 0.9
PTPRFP10586 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPRFP10586 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPRFP10586 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PTPRFP10586 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPRFP10586 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PTPRFP10586 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PTPRFP10586 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.65■□□□□ 0.9
PTPRFP10586 MCCD1P2-201ENST00000423228 335 ntBASIC20.65■□□□□ 0.9
PTPRFP10586 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.65■□□□□ 0.9
PTPRFP10586 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms