Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FAM228BP0C875 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FAM228BP0C875 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
FAM228BP0C875 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.34■□□□□ 0.69
FAM228BP0C875 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FAM228BP0C875 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.34■□□□□ 0.69
FAM228BP0C875 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FAM228BP0C875 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FAM228BP0C875 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
FAM228BP0C875 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FAM228BP0C875 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
FAM228BP0C875 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
FAM228BP0C875 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
FAM228BP0C875 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
FAM228BP0C875 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
FAM228BP0C875 KRT17P2-201ENST00000300992 1314 ntBASIC19.33■□□□□ 0.69
FAM228BP0C875 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.33■□□□□ 0.69
FAM228BP0C875 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
FAM228BP0C875 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
FAM228BP0C875 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.33■□□□□ 0.69
FAM228BP0C875 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
FAM228BP0C875 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.33■□□□□ 0.68
FAM228BP0C875 DUTP2-201ENST00000519164 463 ntBASIC19.33■□□□□ 0.68
FAM228BP0C875 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.33■□□□□ 0.68
FAM228BP0C875 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.33■□□□□ 0.68
FAM228BP0C875 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.33■□□□□ 0.68
FAM228BP0C875 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
FAM228BP0C875 AC010947.1-201ENST00000623454 693 ntBASIC19.33■□□□□ 0.68
FAM228BP0C875 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
FAM228BP0C875 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
FAM228BP0C875 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FAM228BP0C875 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FAM228BP0C875 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FAM228BP0C875 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.33■□□□□ 0.68
FAM228BP0C875 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FAM228BP0C875 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.33■□□□□ 0.68
FAM228BP0C875 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FAM228BP0C875 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FAM228BP0C875 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
FAM228BP0C875 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.33■□□□□ 0.68
FAM228BP0C875 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
FAM228BP0C875 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
FAM228BP0C875 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FAM228BP0C875 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FAM228BP0C875 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FAM228BP0C875 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.32■□□□□ 0.68
FAM228BP0C875 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
FAM228BP0C875 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FAM228BP0C875 AC012313.1-201ENST00000593393 3059 ntBASIC19.32■□□□□ 0.68
FAM228BP0C875 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FAM228BP0C875 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FAM228BP0C875 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
FAM228BP0C875 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FAM228BP0C875 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
FAM228BP0C875 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FAM228BP0C875 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
FAM228BP0C875 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FAM228BP0C875 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FAM228BP0C875 AC009947.2-201ENST00000444014 672 ntBASIC19.32■□□□□ 0.68
FAM228BP0C875 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.32■□□□□ 0.68
FAM228BP0C875 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.32■□□□□ 0.68
FAM228BP0C875 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
FAM228BP0C875 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.32■□□□□ 0.68
FAM228BP0C875 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FAM228BP0C875 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.32■□□□□ 0.68
FAM228BP0C875 TMEM191A-211ENST00000637163 1067 ntBASIC19.32■□□□□ 0.68
FAM228BP0C875 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.32■□□□□ 0.68
FAM228BP0C875 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.32■□□□□ 0.68
FAM228BP0C875 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FAM228BP0C875 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.32■□□□□ 0.68
FAM228BP0C875 AL355312.1-201ENST00000407115 2176 ntBASIC19.32■□□□□ 0.68
FAM228BP0C875 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FAM228BP0C875 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.32■□□□□ 0.68
FAM228BP0C875 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.32■□□□□ 0.68
FAM228BP0C875 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FAM228BP0C875 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
FAM228BP0C875 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.31■□□□□ 0.68
FAM228BP0C875 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
FAM228BP0C875 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FAM228BP0C875 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FAM228BP0C875 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
FAM228BP0C875 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FAM228BP0C875 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.31■□□□□ 0.68
FAM228BP0C875 AC080080.1-201ENST00000625121 2420 ntBASIC19.31■□□□□ 0.68
FAM228BP0C875 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.31■□□□□ 0.68
FAM228BP0C875 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FAM228BP0C875 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FAM228BP0C875 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
FAM228BP0C875 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.31■□□□□ 0.68
FAM228BP0C875 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
FAM228BP0C875 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
FAM228BP0C875 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FAM228BP0C875 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.31■□□□□ 0.68
FAM228BP0C875 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
FAM228BP0C875 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.31■□□□□ 0.68
FAM228BP0C875 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FAM228BP0C875 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FAM228BP0C875 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FAM228BP0C875 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FAM228BP0C875 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms