Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CCDC175P0C221 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CCDC175P0C221 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC175P0C221 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC175P0C221 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC175P0C221 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
CCDC175P0C221 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC175P0C221 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC175P0C221 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC175P0C221 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC175P0C221 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC175P0C221 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CCDC175P0C221 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC175P0C221 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC175P0C221 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC175P0C221 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC175P0C221 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC175P0C221 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCDC175P0C221 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC175P0C221 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC175P0C221 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.6■□□□□ 0.73
CCDC175P0C221 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC175P0C221 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC175P0C221 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC175P0C221 AL023284.2-201ENST00000405850 579 ntBASIC19.6■□□□□ 0.73
CCDC175P0C221 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC175P0C221 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCDC175P0C221 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCDC175P0C221 AC233263.1-201ENST00000578059 224 ntBASIC19.6■□□□□ 0.73
CCDC175P0C221 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC175P0C221 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCDC175P0C221 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC175P0C221 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
CCDC175P0C221 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC175P0C221 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CCDC175P0C221 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC175P0C221 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC175P0C221 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC175P0C221 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC175P0C221 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC175P0C221 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC175P0C221 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC175P0C221 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC175P0C221 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC175P0C221 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC175P0C221 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC175P0C221 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC175P0C221 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.59■□□□□ 0.73
CCDC175P0C221 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC175P0C221 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
CCDC175P0C221 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CCDC175P0C221 MIR149-201ENST00000384879 89 ntBASIC19.59■□□□□ 0.73
CCDC175P0C221 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.59■□□□□ 0.73
CCDC175P0C221 KSR1P1-201ENST00000446298 240 ntBASIC19.59■□□□□ 0.73
CCDC175P0C221 FAM207BP-201ENST00000447172 505 ntBASIC19.59■□□□□ 0.73
CCDC175P0C221 RPS2P4-201ENST00000476944 856 ntBASIC19.59■□□□□ 0.73
CCDC175P0C221 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.59■□□□□ 0.73
CCDC175P0C221 AP002982.1-201ENST00000492365 877 ntBASIC19.59■□□□□ 0.73
CCDC175P0C221 AP003097.1-201ENST00000530657 1135 ntBASIC19.59■□□□□ 0.73
CCDC175P0C221 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC175P0C221 AL353708.3-201ENST00000610272 989 ntBASIC19.59■□□□□ 0.73
CCDC175P0C221 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
CCDC175P0C221 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC175P0C221 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC175P0C221 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC175P0C221 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC175P0C221 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC175P0C221 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC175P0C221 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CCDC175P0C221 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC175P0C221 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC175P0C221 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC175P0C221 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CCDC175P0C221 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC175P0C221 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CCDC175P0C221 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC175P0C221 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.73
CCDC175P0C221 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC175P0C221 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC175P0C221 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CCDC175P0C221 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.58■□□□□ 0.73
CCDC175P0C221 AL121761.2-201ENST00000598007 1648 ntBASIC19.58■□□□□ 0.73
CCDC175P0C221 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC175P0C221 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC175P0C221 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC175P0C221 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC175P0C221 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
CCDC175P0C221 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
CCDC175P0C221 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CCDC175P0C221 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC175P0C221 AL163051.1-201ENST00000569214 1512 ntBASIC19.58■□□□□ 0.73
CCDC175P0C221 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC175P0C221 AC008040.2-201ENST00000461049 708 ntBASIC19.58■□□□□ 0.72
CCDC175P0C221 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC175P0C221 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC175P0C221 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
CCDC175P0C221 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC175P0C221 AC026271.3-201ENST00000571884 352 ntBASIC19.58■□□□□ 0.72
CCDC175P0C221 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC175P0C221 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms