Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLTAP09496 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.81■□□□□ 0.76
CLTAP09496 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLTAP09496 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.81■□□□□ 0.76
CLTAP09496 LINC01126-201ENST00000623515 1646 ntBASIC19.81■□□□□ 0.76
CLTAP09496 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.81■□□□□ 0.76
CLTAP09496 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
CLTAP09496 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.81■□□□□ 0.76
CLTAP09496 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLTAP09496 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.81■□□□□ 0.76
CLTAP09496 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLTAP09496 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.81■□□□□ 0.76
CLTAP09496 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.81■□□□□ 0.76
CLTAP09496 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLTAP09496 TSSC2-201ENST00000450217 709 ntBASIC19.81■□□□□ 0.76
CLTAP09496 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.81■□□□□ 0.76
CLTAP09496 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLTAP09496 AC093458.2-201ENST00000623150 629 ntBASIC19.81■□□□□ 0.76
CLTAP09496 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLTAP09496 GMCL1P1-201ENST00000463439 1581 ntBASIC19.81■□□□□ 0.76
CLTAP09496 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLTAP09496 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CLTAP09496 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.81■□□□□ 0.76
CLTAP09496 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLTAP09496 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
CLTAP09496 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLTAP09496 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLTAP09496 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.81■□□□□ 0.76
CLTAP09496 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLTAP09496 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.8■□□□□ 0.76
CLTAP09496 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.8■□□□□ 0.76
CLTAP09496 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.8■□□□□ 0.76
CLTAP09496 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLTAP09496 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.8■□□□□ 0.76
CLTAP09496 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.8■□□□□ 0.76
CLTAP09496 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.8■□□□□ 0.76
CLTAP09496 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLTAP09496 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLTAP09496 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLTAP09496 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.8■□□□□ 0.76
CLTAP09496 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLTAP09496 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLTAP09496 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLTAP09496 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLTAP09496 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CLTAP09496 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.8■□□□□ 0.76
CLTAP09496 AC018470.1-201ENST00000624790 3129 ntBASIC19.8■□□□□ 0.76
CLTAP09496 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLTAP09496 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.8■□□□□ 0.76
CLTAP09496 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.8■□□□□ 0.76
CLTAP09496 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLTAP09496 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLTAP09496 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.8■□□□□ 0.76
CLTAP09496 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLTAP09496 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.8■□□□□ 0.76
CLTAP09496 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.8■□□□□ 0.76
CLTAP09496 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.8■□□□□ 0.76
CLTAP09496 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.8■□□□□ 0.76
CLTAP09496 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLTAP09496 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.8■□□□□ 0.76
CLTAP09496 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CLTAP09496 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CLTAP09496 AL353692.3-201ENST00000407031 1396 ntBASIC19.8■□□□□ 0.76
CLTAP09496 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLTAP09496 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.8■□□□□ 0.76
CLTAP09496 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLTAP09496 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLTAP09496 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.8■□□□□ 0.76
CLTAP09496 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLTAP09496 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLTAP09496 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLTAP09496 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CLTAP09496 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLTAP09496 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLTAP09496 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
CLTAP09496 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLTAP09496 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.79■□□□□ 0.76
CLTAP09496 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.79■□□□□ 0.76
CLTAP09496 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.79■□□□□ 0.76
CLTAP09496 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.79■□□□□ 0.76
CLTAP09496 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.79■□□□□ 0.76
CLTAP09496 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLTAP09496 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLTAP09496 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.79■□□□□ 0.76
CLTAP09496 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLTAP09496 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLTAP09496 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLTAP09496 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLTAP09496 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.79■□□□□ 0.76
CLTAP09496 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.79■□□□□ 0.76
CLTAP09496 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLTAP09496 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.79■□□□□ 0.76
CLTAP09496 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLTAP09496 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLTAP09496 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.78■□□□□ 0.76
CLTAP09496 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLTAP09496 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CLTAP09496 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.78■□□□□ 0.76
CLTAP09496 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLTAP09496 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms