Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.59■□□□□ 0.41
KRT6AP02538 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6AP02538 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6AP02538 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
KRT6AP02538 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.58■□□□□ 0.41
KRT6AP02538 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
KRT6AP02538 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.58■□□□□ 0.41
KRT6AP02538 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.58■□□□□ 0.41
KRT6AP02538 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
KRT6AP02538 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
KRT6AP02538 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
KRT6AP02538 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
KRT6AP02538 LINC01126-201ENST00000623515 1646 ntBASIC17.58■□□□□ 0.41
KRT6AP02538 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.58■□□□□ 0.41
KRT6AP02538 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KRT6AP02538 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.58■□□□□ 0.41
KRT6AP02538 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
KRT6AP02538 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.58■□□□□ 0.41
KRT6AP02538 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.58■□□□□ 0.4
KRT6AP02538 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
KRT6AP02538 MMP23A-201ENST00000234610 1017 ntBASIC17.58■□□□□ 0.4
KRT6AP02538 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT6AP02538 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT6AP02538 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KRT6AP02538 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.58■□□□□ 0.4
KRT6AP02538 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT6AP02538 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.58■□□□□ 0.4
KRT6AP02538 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.58■□□□□ 0.4
KRT6AP02538 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.58■□□□□ 0.4
KRT6AP02538 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.58■□□□□ 0.4
KRT6AP02538 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.58■□□□□ 0.4
KRT6AP02538 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
KRT6AP02538 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT6AP02538 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
KRT6AP02538 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KRT6AP02538 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KRT6AP02538 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.58■□□□□ 0.4
KRT6AP02538 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KRT6AP02538 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT6AP02538 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT6AP02538 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KRT6AP02538 AP000997.3-201ENST00000623333 2250 ntBASIC17.58■□□□□ 0.4
KRT6AP02538 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6AP02538 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
KRT6AP02538 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6AP02538 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6AP02538 FZD10-202ENST00000539839 3282 ntBASIC17.57■□□□□ 0.4
KRT6AP02538 CYP2D8P-201ENST00000433633 1490 ntBASIC17.57■□□□□ 0.4
KRT6AP02538 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6AP02538 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6AP02538 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6AP02538 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
KRT6AP02538 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6AP02538 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6AP02538 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6AP02538 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6AP02538 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6AP02538 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.57■□□□□ 0.4
KRT6AP02538 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.57■□□□□ 0.4
KRT6AP02538 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
KRT6AP02538 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
KRT6AP02538 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.57■□□□□ 0.4
KRT6AP02538 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.57■□□□□ 0.4
KRT6AP02538 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.57■□□□□ 0.4
KRT6AP02538 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6AP02538 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.57■□□□□ 0.4
KRT6AP02538 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
KRT6AP02538 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
KRT6AP02538 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.57■□□□□ 0.4
KRT6AP02538 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6AP02538 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.57■□□□□ 0.4
KRT6AP02538 AC010947.1-201ENST00000623454 693 ntBASIC17.57■□□□□ 0.4
KRT6AP02538 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.57■□□□□ 0.4
KRT6AP02538 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
KRT6AP02538 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6AP02538 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
KRT6AP02538 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6AP02538 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6AP02538 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.57■□□□□ 0.4
KRT6AP02538 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6AP02538 AL024508.2-201ENST00000607749 1894 ntBASIC17.56■□□□□ 0.4
KRT6AP02538 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.56■□□□□ 0.4
KRT6AP02538 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.56■□□□□ 0.4
KRT6AP02538 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6AP02538 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6AP02538 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6AP02538 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6AP02538 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6AP02538 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6AP02538 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6AP02538 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.56■□□□□ 0.4
KRT6AP02538 INGX-201ENST00000359239 846 ntBASIC17.56■□□□□ 0.4
KRT6AP02538 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
KRT6AP02538 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6AP02538 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
KRT6AP02538 AC009947.2-201ENST00000444014 672 ntBASIC17.56■□□□□ 0.4
KRT6AP02538 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6AP02538 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
KRT6AP02538 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.56■□□□□ 0.4
KRT6AP02538 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms