Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 AC068587.6-202ENST00000641839 5619 ntBASIC15.71■□□□□ 0.11
DHFRP00374 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.71■□□□□ 0.11
DHFRP00374 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
DHFRP00374 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
DHFRP00374 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DHFRP00374 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
DHFRP00374 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DHFRP00374 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
DHFRP00374 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.71■□□□□ 0.11
DHFRP00374 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
DHFRP00374 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
DHFRP00374 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
DHFRP00374 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DHFRP00374 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DHFRP00374 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DHFRP00374 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DHFRP00374 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
DHFRP00374 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC15.71■□□□□ 0.11
DHFRP00374 BX276092.2-201ENST00000417668 665 ntBASIC15.71■□□□□ 0.11
DHFRP00374 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC15.71■□□□□ 0.11
DHFRP00374 PHB2-213ENST00000546111 858 ntTSL 2 BASIC15.71■□□□□ 0.11
DHFRP00374 OAS3-207ENST00000551007 998 ntTSL 2 BASIC15.71■□□□□ 0.11
DHFRP00374 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC15.71■□□□□ 0.11
DHFRP00374 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
DHFRP00374 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC15.71■□□□□ 0.11
DHFRP00374 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DHFRP00374 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
DHFRP00374 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DHFRP00374 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DHFRP00374 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DHFRP00374 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
DHFRP00374 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.71■□□□□ 0.1
DHFRP00374 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC15.71■□□□□ 0.1
DHFRP00374 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
DHFRP00374 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
DHFRP00374 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
DHFRP00374 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
DHFRP00374 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DHFRP00374 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DHFRP00374 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
DHFRP00374 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DHFRP00374 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
DHFRP00374 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
DHFRP00374 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DHFRP00374 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
DHFRP00374 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DHFRP00374 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DHFRP00374 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DHFRP00374 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
DHFRP00374 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.7■□□□□ 0.1
DHFRP00374 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DHFRP00374 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DHFRP00374 AL390719.1-204ENST00000412397 1219 ntBASIC15.7■□□□□ 0.1
DHFRP00374 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
DHFRP00374 TSPY21P-201ENST00000433481 731 ntBASIC15.7■□□□□ 0.1
DHFRP00374 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
DHFRP00374 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.7■□□□□ 0.1
DHFRP00374 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DHFRP00374 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DHFRP00374 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DHFRP00374 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
DHFRP00374 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
DHFRP00374 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DHFRP00374 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DHFRP00374 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
DHFRP00374 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DHFRP00374 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DHFRP00374 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
DHFRP00374 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DHFRP00374 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DHFRP00374 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.7■□□□□ 0.1
DHFRP00374 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.7■□□□□ 0.1
DHFRP00374 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DHFRP00374 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
DHFRP00374 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
DHFRP00374 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DHFRP00374 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DHFRP00374 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC15.69■□□□□ 0.1
DHFRP00374 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DHFRP00374 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DHFRP00374 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DHFRP00374 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
DHFRP00374 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
DHFRP00374 KRT17P1-201ENST00000399211 1546 ntBASIC15.69■□□□□ 0.1
DHFRP00374 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
DHFRP00374 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DHFRP00374 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.69■□□□□ 0.1
DHFRP00374 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
DHFRP00374 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DHFRP00374 AC008556.1-201ENST00000610908 2040 ntBASIC15.69■□□□□ 0.1
DHFRP00374 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DHFRP00374 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC15.69■□□□□ 0.1
DHFRP00374 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
DHFRP00374 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC15.69■□□□□ 0.1
DHFRP00374 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC15.69■□□□□ 0.1
DHFRP00374 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15.69■□□□□ 0.1
DHFRP00374 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DHFRP00374 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
DHFRP00374 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DHFRP00374 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms