Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PPP1R3DO95685 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPP1R3DO95685 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.4■□□□□ 0.22
PPP1R3DO95685 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
PPP1R3DO95685 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPP1R3DO95685 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.4■□□□□ 0.22
PPP1R3DO95685 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.4■□□□□ 0.22
PPP1R3DO95685 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPP1R3DO95685 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPP1R3DO95685 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
PPP1R3DO95685 CCR12P-201ENST00000446203 998 ntBASIC16.4■□□□□ 0.22
PPP1R3DO95685 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.4■□□□□ 0.22
PPP1R3DO95685 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.4■□□□□ 0.22
PPP1R3DO95685 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.4■□□□□ 0.22
PPP1R3DO95685 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.4■□□□□ 0.22
PPP1R3DO95685 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPP1R3DO95685 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPP1R3DO95685 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.4■□□□□ 0.22
PPP1R3DO95685 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPP1R3DO95685 AC020916.1-201ENST00000587762 1774 ntBASIC16.4■□□□□ 0.22
PPP1R3DO95685 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPP1R3DO95685 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPP1R3DO95685 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPP1R3DO95685 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PPP1R3DO95685 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.4■□□□□ 0.22
PPP1R3DO95685 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PPP1R3DO95685 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPP1R3DO95685 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPP1R3DO95685 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
PPP1R3DO95685 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PPP1R3DO95685 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
PPP1R3DO95685 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.39■□□□□ 0.21
PPP1R3DO95685 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PPP1R3DO95685 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.39■□□□□ 0.21
PPP1R3DO95685 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PPP1R3DO95685 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PPP1R3DO95685 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PPP1R3DO95685 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PPP1R3DO95685 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.39■□□□□ 0.21
PPP1R3DO95685 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.39■□□□□ 0.21
PPP1R3DO95685 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.39■□□□□ 0.21
PPP1R3DO95685 AC092338.2-201ENST00000568827 1415 ntBASIC16.39■□□□□ 0.21
PPP1R3DO95685 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PPP1R3DO95685 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PPP1R3DO95685 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PPP1R3DO95685 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.39■□□□□ 0.21
PPP1R3DO95685 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PPP1R3DO95685 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.39■□□□□ 0.21
PPP1R3DO95685 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PPP1R3DO95685 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PPP1R3DO95685 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PPP1R3DO95685 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PPP1R3DO95685 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PPP1R3DO95685 BX088651.1-201ENST00000540551 451 ntBASIC16.39■□□□□ 0.21
PPP1R3DO95685 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PPP1R3DO95685 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.39■□□□□ 0.21
PPP1R3DO95685 AC112497.1-201ENST00000624824 639 ntBASIC16.39■□□□□ 0.21
PPP1R3DO95685 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PPP1R3DO95685 TMEM191A-211ENST00000637163 1067 ntBASIC16.39■□□□□ 0.21
PPP1R3DO95685 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PPP1R3DO95685 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PPP1R3DO95685 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PPP1R3DO95685 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.39■□□□□ 0.21
PPP1R3DO95685 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.39■□□□□ 0.21
PPP1R3DO95685 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PPP1R3DO95685 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PPP1R3DO95685 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PPP1R3DO95685 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PPP1R3DO95685 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PPP1R3DO95685 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.39■□□□□ 0.21
PPP1R3DO95685 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PPP1R3DO95685 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.39■□□□□ 0.21
PPP1R3DO95685 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
PPP1R3DO95685 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PPP1R3DO95685 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
PPP1R3DO95685 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PPP1R3DO95685 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
PPP1R3DO95685 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PPP1R3DO95685 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PPP1R3DO95685 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PPP1R3DO95685 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PPP1R3DO95685 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PPP1R3DO95685 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.38■□□□□ 0.21
PPP1R3DO95685 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PPP1R3DO95685 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PPP1R3DO95685 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PPP1R3DO95685 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
PPP1R3DO95685 MIR1238-201ENST00000408483 83 ntBASIC16.38■□□□□ 0.21
PPP1R3DO95685 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.38■□□□□ 0.21
PPP1R3DO95685 AC008550.1-201ENST00000511500 884 ntBASIC16.38■□□□□ 0.21
PPP1R3DO95685 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.38■□□□□ 0.21
PPP1R3DO95685 AC009065.1-201ENST00000564055 1225 ntBASIC16.38■□□□□ 0.21
PPP1R3DO95685 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.38■□□□□ 0.21
PPP1R3DO95685 MIR4785-201ENST00000585005 73 ntBASIC16.38■□□□□ 0.21
PPP1R3DO95685 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.38■□□□□ 0.21
PPP1R3DO95685 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.38■□□□□ 0.21
PPP1R3DO95685 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PPP1R3DO95685 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PPP1R3DO95685 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
PPP1R3DO95685 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms