Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC27.01■■□□□ 1.91
RAPGEF3O95398 CIPC-205ENST00000555437 566 ntTSL 3 BASIC27.01■■□□□ 1.91
RAPGEF3O95398 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
RAPGEF3O95398 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC27.01■■□□□ 1.91
RAPGEF3O95398 CITED2-204ENST00000618718 901 ntTSL 2 BASIC27.01■■□□□ 1.91
RAPGEF3O95398 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC27.01■■□□□ 1.91
RAPGEF3O95398 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
RAPGEF3O95398 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
RAPGEF3O95398 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC27.01■■□□□ 1.91
RAPGEF3O95398 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
RAPGEF3O95398 TBC1D3P5-201ENST00000579401 1545 ntBASIC27■■□□□ 1.91
RAPGEF3O95398 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC27■■□□□ 1.91
RAPGEF3O95398 PC-214ENST00000628663 1470 ntTSL 5 BASIC27■■□□□ 1.91
RAPGEF3O95398 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC27■■□□□ 1.91
RAPGEF3O95398 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RAPGEF3O95398 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC27■■□□□ 1.91
RAPGEF3O95398 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC27■■□□□ 1.91
RAPGEF3O95398 ACTG1P14-201ENST00000446382 1122 ntBASIC27■■□□□ 1.91
RAPGEF3O95398 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC27■■□□□ 1.91
RAPGEF3O95398 TK1-204ENST00000590430 683 ntTSL 3 BASIC27■■□□□ 1.91
RAPGEF3O95398 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC27■■□□□ 1.91
RAPGEF3O95398 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RAPGEF3O95398 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
RAPGEF3O95398 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC27■■□□□ 1.91
RAPGEF3O95398 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC27■■□□□ 1.91
RAPGEF3O95398 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
RAPGEF3O95398 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RAPGEF3O95398 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC26.99■■□□□ 1.91
RAPGEF3O95398 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC26.99■■□□□ 1.91
RAPGEF3O95398 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
RAPGEF3O95398 MRPL20P1-201ENST00000400819 433 ntBASIC26.99■■□□□ 1.91
RAPGEF3O95398 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC26.99■■□□□ 1.91
RAPGEF3O95398 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
RAPGEF3O95398 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC26.99■■□□□ 1.91
RAPGEF3O95398 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC26.99■■□□□ 1.91
RAPGEF3O95398 AC093520.2-201ENST00000561830 333 ntBASIC26.99■■□□□ 1.91
RAPGEF3O95398 AC091812.2-201ENST00000619081 385 ntBASIC26.99■■□□□ 1.91
RAPGEF3O95398 AC105339.1-204ENST00000636249 355 ntBASIC26.99■■□□□ 1.91
RAPGEF3O95398 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC26.99■■□□□ 1.91
RAPGEF3O95398 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC26.99■■□□□ 1.91
RAPGEF3O95398 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
RAPGEF3O95398 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
RAPGEF3O95398 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC26.99■■□□□ 1.91
RAPGEF3O95398 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
RAPGEF3O95398 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RAPGEF3O95398 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RAPGEF3O95398 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC26.98■■□□□ 1.91
RAPGEF3O95398 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC26.98■■□□□ 1.91
RAPGEF3O95398 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC26.98■■□□□ 1.91
RAPGEF3O95398 AC122714.2-201ENST00000502787 707 ntBASIC26.98■■□□□ 1.91
RAPGEF3O95398 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC26.98■■□□□ 1.91
RAPGEF3O95398 DAD1-205ENST00000543337 501 ntTSL 3 BASIC26.98■■□□□ 1.91
RAPGEF3O95398 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
RAPGEF3O95398 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC26.98■■□□□ 1.91
RAPGEF3O95398 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC26.98■■□□□ 1.91
RAPGEF3O95398 AC073592.5-201ENST00000624854 528 ntBASIC26.98■■□□□ 1.91
RAPGEF3O95398 AC092902.6-201ENST00000641783 218 ntBASIC26.98■■□□□ 1.91
RAPGEF3O95398 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC26.98■■□□□ 1.91
RAPGEF3O95398 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC26.98■■□□□ 1.91
RAPGEF3O95398 AL157384.1-201ENST00000445995 2473 ntBASIC26.98■■□□□ 1.91
RAPGEF3O95398 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RAPGEF3O95398 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC26.98■■□□□ 1.91
RAPGEF3O95398 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RAPGEF3O95398 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RAPGEF3O95398 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC26.98■■□□□ 1.91
RAPGEF3O95398 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
RAPGEF3O95398 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
RAPGEF3O95398 AC063926.2-201ENST00000623766 1308 ntBASIC26.97■■□□□ 1.91
RAPGEF3O95398 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
RAPGEF3O95398 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
RAPGEF3O95398 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
RAPGEF3O95398 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
RAPGEF3O95398 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC26.97■■□□□ 1.91
RAPGEF3O95398 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC26.97■■□□□ 1.91
RAPGEF3O95398 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC26.97■■□□□ 1.91
RAPGEF3O95398 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
RAPGEF3O95398 SMN2-210ENST00000511812 867 ntTSL 2 BASIC26.97■■□□□ 1.91
RAPGEF3O95398 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
RAPGEF3O95398 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC26.97■■□□□ 1.91
RAPGEF3O95398 AC096734.2-201ENST00000562054 433 ntBASIC26.97■■□□□ 1.91
RAPGEF3O95398 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC26.97■■□□□ 1.91
RAPGEF3O95398 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RAPGEF3O95398 ADM-208ENST00000534464 1640 ntTSL 2 BASIC26.97■■□□□ 1.91
RAPGEF3O95398 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC26.97■■□□□ 1.91
RAPGEF3O95398 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC26.97■■□□□ 1.91
RAPGEF3O95398 SNAI3-AS1-205ENST00000568633 2096 ntBASIC26.96■■□□□ 1.91
RAPGEF3O95398 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RAPGEF3O95398 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RAPGEF3O95398 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
RAPGEF3O95398 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC26.96■■□□□ 1.91
RAPGEF3O95398 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
RAPGEF3O95398 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
RAPGEF3O95398 AC148477.5-201ENST00000625164 1645 ntBASIC26.96■■□□□ 1.91
RAPGEF3O95398 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC26.96■■□□□ 1.91
RAPGEF3O95398 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
RAPGEF3O95398 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC26.96■■□□□ 1.91
RAPGEF3O95398 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
RAPGEF3O95398 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
RAPGEF3O95398 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC26.95■■□□□ 1.91
RAPGEF3O95398 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms