Protein–RNA interactions for Protein: O95347

SMC2, Structural maintenance of chromosomes protein 2, humanhuman

Predictions only

Length 1,197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2O95347 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.51■□□□□ 0.87
SMC2O95347 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMC2O95347 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SMC2O95347 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SMC2O95347 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMC2O95347 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMC2O95347 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SMC2O95347 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMC2O95347 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.5■□□□□ 0.87
SMC2O95347 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMC2O95347 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMC2O95347 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.5■□□□□ 0.87
SMC2O95347 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMC2O95347 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.5■□□□□ 0.87
SMC2O95347 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMC2O95347 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMC2O95347 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.5■□□□□ 0.87
SMC2O95347 CCR12P-201ENST00000446203 998 ntBASIC20.5■□□□□ 0.87
SMC2O95347 RBM17P1-201ENST00000453646 1190 ntBASIC20.5■□□□□ 0.87
SMC2O95347 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.5■□□□□ 0.87
SMC2O95347 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.5■□□□□ 0.87
SMC2O95347 AC009065.1-201ENST00000564055 1225 ntBASIC20.5■□□□□ 0.87
SMC2O95347 WWOX-216ENST00000569818 525 ntBASIC20.5■□□□□ 0.87
SMC2O95347 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.5■□□□□ 0.87
SMC2O95347 CR769767.2-201ENST00000622735 460 ntBASIC20.5■□□□□ 0.87
SMC2O95347 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SMC2O95347 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMC2O95347 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SMC2O95347 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMC2O95347 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.5■□□□□ 0.87
SMC2O95347 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMC2O95347 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMC2O95347 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMC2O95347 AC099343.3-201ENST00000605834 2503 ntBASIC20.5■□□□□ 0.87
SMC2O95347 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMC2O95347 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.49■□□□□ 0.87
SMC2O95347 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMC2O95347 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.49■□□□□ 0.87
SMC2O95347 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SMC2O95347 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMC2O95347 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMC2O95347 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.49■□□□□ 0.87
SMC2O95347 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMC2O95347 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SMC2O95347 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
SMC2O95347 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.49■□□□□ 0.87
SMC2O95347 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.49■□□□□ 0.87
SMC2O95347 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
SMC2O95347 MIR718-201ENST00000390190 70 ntBASIC20.49■□□□□ 0.87
SMC2O95347 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.49■□□□□ 0.87
SMC2O95347 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.49■□□□□ 0.87
SMC2O95347 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.49■□□□□ 0.87
SMC2O95347 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.49■□□□□ 0.87
SMC2O95347 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMC2O95347 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMC2O95347 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SMC2O95347 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMC2O95347 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMC2O95347 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMC2O95347 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
SMC2O95347 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMC2O95347 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SMC2O95347 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMC2O95347 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SMC2O95347 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SMC2O95347 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMC2O95347 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SMC2O95347 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.48■□□□□ 0.87
SMC2O95347 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.48■□□□□ 0.87
SMC2O95347 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMC2O95347 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMC2O95347 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SMC2O95347 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
SMC2O95347 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.48■□□□□ 0.87
SMC2O95347 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SMC2O95347 BX088651.1-201ENST00000540551 451 ntBASIC20.48■□□□□ 0.87
SMC2O95347 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.48■□□□□ 0.87
SMC2O95347 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SMC2O95347 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SMC2O95347 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMC2O95347 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SMC2O95347 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMC2O95347 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SMC2O95347 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMC2O95347 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMC2O95347 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.48■□□□□ 0.87
SMC2O95347 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.48■□□□□ 0.87
SMC2O95347 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SMC2O95347 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMC2O95347 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SMC2O95347 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SMC2O95347 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMC2O95347 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
SMC2O95347 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
SMC2O95347 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.47■□□□□ 0.87
SMC2O95347 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SMC2O95347 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SMC2O95347 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.47■□□□□ 0.87
SMC2O95347 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.47■□□□□ 0.87
SMC2O95347 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms