Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.08■□□□□ 0.64
RTN3O95197 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTN3O95197 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RTN3O95197 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RTN3O95197 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.08■□□□□ 0.64
RTN3O95197 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RTN3O95197 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTN3O95197 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RTN3O95197 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.07■□□□□ 0.64
RTN3O95197 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTN3O95197 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
RTN3O95197 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RTN3O95197 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RTN3O95197 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RTN3O95197 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RTN3O95197 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTN3O95197 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.07■□□□□ 0.64
RTN3O95197 TSPY12P-201ENST00000421279 868 ntBASIC19.07■□□□□ 0.64
RTN3O95197 DUSP5P1-201ENST00000441325 1139 ntBASIC19.07■□□□□ 0.64
RTN3O95197 AP000867.3-201ENST00000524675 377 ntBASIC19.07■□□□□ 0.64
RTN3O95197 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.07■□□□□ 0.64
RTN3O95197 KRT126P-201ENST00000549467 1181 ntBASIC19.07■□□□□ 0.64
RTN3O95197 AC012615.1-201ENST00000565797 1299 ntBASIC19.07■□□□□ 0.64
RTN3O95197 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.07■□□□□ 0.64
RTN3O95197 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.07■□□□□ 0.64
RTN3O95197 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.07■□□□□ 0.64
RTN3O95197 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.07■□□□□ 0.64
RTN3O95197 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTN3O95197 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.07■□□□□ 0.64
RTN3O95197 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTN3O95197 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTN3O95197 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RTN3O95197 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTN3O95197 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTN3O95197 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTN3O95197 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.06■□□□□ 0.64
RTN3O95197 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.06■□□□□ 0.64
RTN3O95197 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTN3O95197 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTN3O95197 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RTN3O95197 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.06■□□□□ 0.64
RTN3O95197 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.06■□□□□ 0.64
RTN3O95197 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.06■□□□□ 0.64
RTN3O95197 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTN3O95197 PRELID1P1-202ENST00000567272 903 ntBASIC19.06■□□□□ 0.64
RTN3O95197 Z69720.1-201ENST00000601483 472 ntBASIC19.06■□□□□ 0.64
RTN3O95197 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTN3O95197 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.06■□□□□ 0.64
RTN3O95197 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTN3O95197 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RTN3O95197 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.06■□□□□ 0.64
RTN3O95197 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTN3O95197 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTN3O95197 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTN3O95197 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTN3O95197 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTN3O95197 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RTN3O95197 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTN3O95197 AC233702.3-201ENST00000578656 1387 ntBASIC19.06■□□□□ 0.64
RTN3O95197 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTN3O95197 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTN3O95197 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.05■□□□□ 0.64
RTN3O95197 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
RTN3O95197 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
RTN3O95197 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTN3O95197 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTN3O95197 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTN3O95197 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTN3O95197 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RTN3O95197 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTN3O95197 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTN3O95197 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTN3O95197 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RTN3O95197 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTN3O95197 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.05■□□□□ 0.64
RTN3O95197 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTN3O95197 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.05■□□□□ 0.64
RTN3O95197 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTN3O95197 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RTN3O95197 AC246785.2-201ENST00000432512 513 ntBASIC19.05■□□□□ 0.64
RTN3O95197 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTN3O95197 NUS1P1-201ENST00000446295 882 ntBASIC19.05■□□□□ 0.64
RTN3O95197 AC011840.4-201ENST00000578471 627 ntBASIC19.05■□□□□ 0.64
RTN3O95197 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.05■□□□□ 0.64
RTN3O95197 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.05■□□□□ 0.64
RTN3O95197 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTN3O95197 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.05■□□□□ 0.64
RTN3O95197 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTN3O95197 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RTN3O95197 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
RTN3O95197 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RTN3O95197 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
RTN3O95197 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RTN3O95197 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RTN3O95197 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTN3O95197 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RTN3O95197 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTN3O95197 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTN3O95197 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTN3O95197 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms