Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFPL1O75677 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFPL1O75677 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RFPL1O75677 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFPL1O75677 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RFPL1O75677 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.21■□□□□ 0.51
RFPL1O75677 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RFPL1O75677 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RFPL1O75677 KRT18P55-202ENST00000578578 1546 ntBASIC18.21■□□□□ 0.51
RFPL1O75677 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RFPL1O75677 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFPL1O75677 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFPL1O75677 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFPL1O75677 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.21■□□□□ 0.51
RFPL1O75677 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RFPL1O75677 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFPL1O75677 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.21■□□□□ 0.51
RFPL1O75677 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RFPL1O75677 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RFPL1O75677 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RFPL1O75677 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFPL1O75677 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RFPL1O75677 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RFPL1O75677 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFPL1O75677 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RFPL1O75677 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFPL1O75677 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RFPL1O75677 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFPL1O75677 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RFPL1O75677 AC080080.1-201ENST00000625121 2420 ntBASIC18.2■□□□□ 0.5
RFPL1O75677 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.2■□□□□ 0.5
RFPL1O75677 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.2■□□□□ 0.5
RFPL1O75677 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RFPL1O75677 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFPL1O75677 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RFPL1O75677 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFPL1O75677 CRYGFP-201ENST00000418459 633 ntBASIC18.2■□□□□ 0.5
RFPL1O75677 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.2■□□□□ 0.5
RFPL1O75677 ECEL1P2-202ENST00000465689 757 ntBASIC18.2■□□□□ 0.5
RFPL1O75677 AC097488.1-201ENST00000507834 756 ntBASIC18.2■□□□□ 0.5
RFPL1O75677 SLC25A1P4-201ENST00000567977 778 ntBASIC18.2■□□□□ 0.5
RFPL1O75677 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.2■□□□□ 0.5
RFPL1O75677 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.2■□□□□ 0.5
RFPL1O75677 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFPL1O75677 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.2■□□□□ 0.5
RFPL1O75677 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFPL1O75677 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RFPL1O75677 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.2■□□□□ 0.5
RFPL1O75677 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RFPL1O75677 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFPL1O75677 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFPL1O75677 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.2■□□□□ 0.5
RFPL1O75677 LINC01126-201ENST00000623515 1646 ntBASIC18.2■□□□□ 0.5
RFPL1O75677 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFPL1O75677 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.19■□□□□ 0.5
RFPL1O75677 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.19■□□□□ 0.5
RFPL1O75677 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
RFPL1O75677 AC009053.2-201ENST00000563701 2365 ntBASIC18.19■□□□□ 0.5
RFPL1O75677 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.19■□□□□ 0.5
RFPL1O75677 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFPL1O75677 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFPL1O75677 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RFPL1O75677 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.19■□□□□ 0.5
RFPL1O75677 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.19■□□□□ 0.5
RFPL1O75677 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RFPL1O75677 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFPL1O75677 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
RFPL1O75677 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFPL1O75677 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFPL1O75677 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFPL1O75677 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFPL1O75677 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RFPL1O75677 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RFPL1O75677 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.19■□□□□ 0.5
RFPL1O75677 CA15P1-201ENST00000481698 905 ntBASIC18.19■□□□□ 0.5
RFPL1O75677 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFPL1O75677 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.19■□□□□ 0.5
RFPL1O75677 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
RFPL1O75677 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.19■□□□□ 0.5
RFPL1O75677 LINC01238-205ENST00000567549 1107 ntBASIC18.19■□□□□ 0.5
RFPL1O75677 WWOX-216ENST00000569818 525 ntBASIC18.19■□□□□ 0.5
RFPL1O75677 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.19■□□□□ 0.5
RFPL1O75677 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RFPL1O75677 AC006011.2-201ENST00000621313 1158 ntBASIC18.19■□□□□ 0.5
RFPL1O75677 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
RFPL1O75677 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFPL1O75677 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
RFPL1O75677 AC141586.5-201ENST00000624546 2050 ntBASIC18.19■□□□□ 0.5
RFPL1O75677 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFPL1O75677 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RFPL1O75677 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFPL1O75677 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RFPL1O75677 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFPL1O75677 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFPL1O75677 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RFPL1O75677 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RFPL1O75677 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFPL1O75677 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.18■□□□□ 0.5
RFPL1O75677 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFPL1O75677 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms