Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF253O75346 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
ZNF253O75346 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF253O75346 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF253O75346 AC018695.7-201ENST00000624587 2492 ntBASIC14.15□□□□□ -0.14
ZNF253O75346 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF253O75346 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF253O75346 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF253O75346 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF253O75346 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF253O75346 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF253O75346 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF253O75346 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF253O75346 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF253O75346 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF253O75346 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF253O75346 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF253O75346 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF253O75346 PPP1R14BP5-201ENST00000440334 435 ntBASIC14.15□□□□□ -0.14
ZNF253O75346 KSR1P1-201ENST00000446298 240 ntBASIC14.15□□□□□ -0.14
ZNF253O75346 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
ZNF253O75346 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF253O75346 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF253O75346 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF253O75346 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
ZNF253O75346 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
ZNF253O75346 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF253O75346 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
ZNF253O75346 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
ZNF253O75346 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF253O75346 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF253O75346 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.15□□□□□ -0.14
ZNF253O75346 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF253O75346 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF253O75346 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF253O75346 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
ZNF253O75346 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF253O75346 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF253O75346 AD000864.1-201ENST00000624076 2295 ntBASIC14.15□□□□□ -0.14
ZNF253O75346 HTR7P1-201ENST00000538670 1336 ntBASIC14.15□□□□□ -0.15
ZNF253O75346 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC14.15□□□□□ -0.15
ZNF253O75346 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF253O75346 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF253O75346 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF253O75346 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.14□□□□□ -0.15
ZNF253O75346 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF253O75346 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC14.14□□□□□ -0.15
ZNF253O75346 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF253O75346 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.14□□□□□ -0.15
ZNF253O75346 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.14□□□□□ -0.15
ZNF253O75346 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ZNF253O75346 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF253O75346 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF253O75346 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF253O75346 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.14□□□□□ -0.15
ZNF253O75346 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF253O75346 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF253O75346 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF253O75346 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF253O75346 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ZNF253O75346 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF253O75346 MIR935-201ENST00000401179 91 ntBASIC14.14□□□□□ -0.15
ZNF253O75346 AC004951.3-201ENST00000418645 1148 ntBASIC14.14□□□□□ -0.15
ZNF253O75346 AL353807.1-201ENST00000427475 662 ntBASIC14.14□□□□□ -0.15
ZNF253O75346 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF253O75346 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14.14□□□□□ -0.15
ZNF253O75346 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
ZNF253O75346 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.14□□□□□ -0.15
ZNF253O75346 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.14□□□□□ -0.15
ZNF253O75346 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC14.14□□□□□ -0.15
ZNF253O75346 AC110285.5-201ENST00000611501 352 ntBASIC14.14□□□□□ -0.15
ZNF253O75346 AL023875.1-201ENST00000640777 796 ntBASIC14.14□□□□□ -0.15
ZNF253O75346 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF253O75346 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF253O75346 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF253O75346 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF253O75346 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
ZNF253O75346 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF253O75346 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF253O75346 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
ZNF253O75346 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF253O75346 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.14□□□□□ -0.15
ZNF253O75346 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF253O75346 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF253O75346 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF253O75346 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF253O75346 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ZNF253O75346 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF253O75346 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF253O75346 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.14□□□□□ -0.15
ZNF253O75346 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.14□□□□□ -0.15
ZNF253O75346 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
ZNF253O75346 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF253O75346 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF253O75346 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF253O75346 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF253O75346 AL499627.1-201ENST00000569373 2188 ntBASIC14.13□□□□□ -0.15
ZNF253O75346 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF253O75346 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF253O75346 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms