Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
OPHN1O60890 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
OPHN1O60890 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.94■□□□□ 0.62
OPHN1O60890 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
OPHN1O60890 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.94■□□□□ 0.62
OPHN1O60890 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.94■□□□□ 0.62
OPHN1O60890 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.94■□□□□ 0.62
OPHN1O60890 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
OPHN1O60890 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
OPHN1O60890 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.93■□□□□ 0.62
OPHN1O60890 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
OPHN1O60890 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.93■□□□□ 0.62
OPHN1O60890 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
OPHN1O60890 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
OPHN1O60890 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
OPHN1O60890 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
OPHN1O60890 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
OPHN1O60890 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
OPHN1O60890 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
OPHN1O60890 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
OPHN1O60890 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.93■□□□□ 0.62
OPHN1O60890 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.93■□□□□ 0.62
OPHN1O60890 AC112907.2-201ENST00000448639 330 ntBASIC18.93■□□□□ 0.62
OPHN1O60890 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
OPHN1O60890 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
OPHN1O60890 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
OPHN1O60890 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.93■□□□□ 0.62
OPHN1O60890 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.93■□□□□ 0.62
OPHN1O60890 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.93■□□□□ 0.62
OPHN1O60890 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.93■□□□□ 0.62
OPHN1O60890 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.93■□□□□ 0.62
OPHN1O60890 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
OPHN1O60890 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.93■□□□□ 0.62
OPHN1O60890 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.93■□□□□ 0.62
OPHN1O60890 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
OPHN1O60890 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.93■□□□□ 0.62
OPHN1O60890 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
OPHN1O60890 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
OPHN1O60890 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
OPHN1O60890 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
OPHN1O60890 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.93■□□□□ 0.62
OPHN1O60890 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
OPHN1O60890 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
OPHN1O60890 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
OPHN1O60890 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
OPHN1O60890 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
OPHN1O60890 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
OPHN1O60890 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
OPHN1O60890 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
OPHN1O60890 AC020916.1-201ENST00000587762 1774 ntBASIC18.92■□□□□ 0.62
OPHN1O60890 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
OPHN1O60890 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
OPHN1O60890 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
OPHN1O60890 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
OPHN1O60890 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.92■□□□□ 0.62
OPHN1O60890 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
OPHN1O60890 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.92■□□□□ 0.62
OPHN1O60890 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.92■□□□□ 0.62
OPHN1O60890 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
OPHN1O60890 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
OPHN1O60890 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
OPHN1O60890 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
OPHN1O60890 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
OPHN1O60890 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.92■□□□□ 0.62
OPHN1O60890 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
OPHN1O60890 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.92■□□□□ 0.62
OPHN1O60890 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.92■□□□□ 0.62
OPHN1O60890 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
OPHN1O60890 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.92■□□□□ 0.62
OPHN1O60890 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
OPHN1O60890 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
OPHN1O60890 KRT8P50-201ENST00000562022 1438 ntBASIC18.91■□□□□ 0.62
OPHN1O60890 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
OPHN1O60890 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
OPHN1O60890 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
OPHN1O60890 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
OPHN1O60890 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
OPHN1O60890 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
OPHN1O60890 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
OPHN1O60890 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
OPHN1O60890 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
OPHN1O60890 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
OPHN1O60890 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
OPHN1O60890 AC036111.1-201ENST00000533973 1582 ntBASIC18.91■□□□□ 0.62
OPHN1O60890 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
OPHN1O60890 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.91■□□□□ 0.62
OPHN1O60890 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
OPHN1O60890 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
OPHN1O60890 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.91■□□□□ 0.62
OPHN1O60890 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.91■□□□□ 0.62
OPHN1O60890 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
OPHN1O60890 ZNF444P1-201ENST00000559497 298 ntBASIC18.91■□□□□ 0.62
OPHN1O60890 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.91■□□□□ 0.62
OPHN1O60890 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.91■□□□□ 0.62
OPHN1O60890 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
OPHN1O60890 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
OPHN1O60890 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
OPHN1O60890 PCDHB18P-201ENST00000524813 2368 ntBASIC18.91■□□□□ 0.62
OPHN1O60890 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
OPHN1O60890 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms