Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.47■□□□□ 0.23
SSX4O60224 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.47■□□□□ 0.23
SSX4O60224 AC104076.2-201ENST00000448912 469 ntBASIC16.47■□□□□ 0.23
SSX4O60224 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.47■□□□□ 0.23
SSX4O60224 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.47■□□□□ 0.23
SSX4O60224 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.47■□□□□ 0.23
SSX4O60224 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SSX4O60224 AC087388.1-201ENST00000571370 1112 ntBASIC16.47■□□□□ 0.23
SSX4O60224 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.47■□□□□ 0.23
SSX4O60224 NTF6B-201ENST00000591913 560 ntBASIC16.47■□□□□ 0.23
SSX4O60224 AC011298.2-201ENST00000617989 482 ntBASIC16.47■□□□□ 0.23
SSX4O60224 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSX4O60224 PP12613-201ENST00000424958 2230 ntBASIC16.47■□□□□ 0.23
SSX4O60224 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSX4O60224 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SSX4O60224 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSX4O60224 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SSX4O60224 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SSX4O60224 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SSX4O60224 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSX4O60224 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.47■□□□□ 0.23
SSX4O60224 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.47■□□□□ 0.23
SSX4O60224 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SSX4O60224 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSX4O60224 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.47■□□□□ 0.23
SSX4O60224 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SSX4O60224 UBALD1-205ENST00000590891 2641 ntBASIC16.47■□□□□ 0.23
SSX4O60224 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSX4O60224 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SSX4O60224 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSX4O60224 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSX4O60224 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.46■□□□□ 0.23
SSX4O60224 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.46■□□□□ 0.23
SSX4O60224 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSX4O60224 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
SSX4O60224 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSX4O60224 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.46■□□□□ 0.23
SSX4O60224 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SSX4O60224 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SSX4O60224 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SSX4O60224 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSX4O60224 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SSX4O60224 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.46■□□□□ 0.23
SSX4O60224 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
SSX4O60224 TSPY14P-201ENST00000303979 915 ntBASIC16.46■□□□□ 0.23
SSX4O60224 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSX4O60224 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSX4O60224 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SSX4O60224 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
SSX4O60224 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.46■□□□□ 0.23
SSX4O60224 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SSX4O60224 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.46■□□□□ 0.23
SSX4O60224 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.46■□□□□ 0.23
SSX4O60224 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.46■□□□□ 0.23
SSX4O60224 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
SSX4O60224 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.46■□□□□ 0.23
SSX4O60224 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SSX4O60224 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
SSX4O60224 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSX4O60224 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSX4O60224 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.46■□□□□ 0.23
SSX4O60224 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SSX4O60224 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
SSX4O60224 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.46■□□□□ 0.23
SSX4O60224 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
SSX4O60224 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
SSX4O60224 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SSX4O60224 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.46■□□□□ 0.22
SSX4O60224 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
SSX4O60224 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.46■□□□□ 0.22
SSX4O60224 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
SSX4O60224 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.45■□□□□ 0.22
SSX4O60224 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX4O60224 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.45■□□□□ 0.22
SSX4O60224 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX4O60224 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SSX4O60224 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX4O60224 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX4O60224 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
SSX4O60224 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX4O60224 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX4O60224 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX4O60224 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SSX4O60224 AL391005.1-201ENST00000623953 2435 ntBASIC16.45■□□□□ 0.22
SSX4O60224 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX4O60224 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SSX4O60224 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SSX4O60224 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SSX4O60224 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.45■□□□□ 0.22
SSX4O60224 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX4O60224 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX4O60224 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SSX4O60224 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX4O60224 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SSX4O60224 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX4O60224 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SSX4O60224 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX4O60224 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.45■□□□□ 0.22
SSX4O60224 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.45■□□□□ 0.22
SSX4O60224 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms