Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
EXTL3O43909 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.65■□□□□ 0.74
EXTL3O43909 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
EXTL3O43909 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EXTL3O43909 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.65■□□□□ 0.74
EXTL3O43909 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.65■□□□□ 0.74
EXTL3O43909 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.65■□□□□ 0.74
EXTL3O43909 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.65■□□□□ 0.74
EXTL3O43909 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
EXTL3O43909 KRT126P-201ENST00000549467 1181 ntBASIC19.65■□□□□ 0.74
EXTL3O43909 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.65■□□□□ 0.74
EXTL3O43909 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
EXTL3O43909 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.65■□□□□ 0.74
EXTL3O43909 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.65■□□□□ 0.74
EXTL3O43909 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.65■□□□□ 0.74
EXTL3O43909 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
EXTL3O43909 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EXTL3O43909 AC016734.2-201ENST00000624325 1377 ntBASIC19.65■□□□□ 0.74
EXTL3O43909 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.65■□□□□ 0.74
EXTL3O43909 FLJ13224-201ENST00000313737 1514 ntBASIC19.65■□□□□ 0.74
EXTL3O43909 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
EXTL3O43909 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.65■□□□□ 0.74
EXTL3O43909 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.65■□□□□ 0.74
EXTL3O43909 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EXTL3O43909 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
EXTL3O43909 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
EXTL3O43909 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
EXTL3O43909 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
EXTL3O43909 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.64■□□□□ 0.74
EXTL3O43909 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.64■□□□□ 0.74
EXTL3O43909 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
EXTL3O43909 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
EXTL3O43909 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
EXTL3O43909 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.73
EXTL3O43909 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EXTL3O43909 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.64■□□□□ 0.73
EXTL3O43909 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
EXTL3O43909 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
EXTL3O43909 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.64■□□□□ 0.73
EXTL3O43909 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.64■□□□□ 0.73
EXTL3O43909 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EXTL3O43909 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EXTL3O43909 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EXTL3O43909 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
EXTL3O43909 AC138028.4-201ENST00000564984 1845 ntBASIC19.64■□□□□ 0.73
EXTL3O43909 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EXTL3O43909 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EXTL3O43909 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.64■□□□□ 0.73
EXTL3O43909 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EXTL3O43909 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.64■□□□□ 0.73
EXTL3O43909 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EXTL3O43909 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.63■□□□□ 0.73
EXTL3O43909 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EXTL3O43909 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EXTL3O43909 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EXTL3O43909 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EXTL3O43909 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EXTL3O43909 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EXTL3O43909 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
EXTL3O43909 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.63■□□□□ 0.73
EXTL3O43909 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EXTL3O43909 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EXTL3O43909 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EXTL3O43909 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EXTL3O43909 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EXTL3O43909 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EXTL3O43909 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
EXTL3O43909 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
EXTL3O43909 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.63■□□□□ 0.73
EXTL3O43909 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.63■□□□□ 0.73
EXTL3O43909 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EXTL3O43909 GUSBP12-201ENST00000513727 720 ntBASIC19.63■□□□□ 0.73
EXTL3O43909 AC090616.6-201ENST00000582640 721 ntBASIC19.63■□□□□ 0.73
EXTL3O43909 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
EXTL3O43909 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EXTL3O43909 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.63■□□□□ 0.73
EXTL3O43909 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EXTL3O43909 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EXTL3O43909 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
EXTL3O43909 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
EXTL3O43909 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
EXTL3O43909 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
EXTL3O43909 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EXTL3O43909 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EXTL3O43909 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EXTL3O43909 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EXTL3O43909 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
EXTL3O43909 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
EXTL3O43909 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
EXTL3O43909 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EXTL3O43909 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.62■□□□□ 0.73
EXTL3O43909 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
EXTL3O43909 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EXTL3O43909 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
EXTL3O43909 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
EXTL3O43909 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EXTL3O43909 CHCHD2P8-201ENST00000429873 447 ntBASIC19.62■□□□□ 0.73
EXTL3O43909 TSSC2-201ENST00000450217 709 ntBASIC19.62■□□□□ 0.73
EXTL3O43909 RN7SL606P-201ENST00000472779 293 ntBASIC19.62■□□□□ 0.73
EXTL3O43909 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms