Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PHF1O43189 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHF1O43189 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHF1O43189 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHF1O43189 PVRIG2P-201ENST00000435460 978 ntBASIC15.7■□□□□ 0.1
PHF1O43189 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHF1O43189 FDX1P1-201ENST00000449115 551 ntBASIC15.7■□□□□ 0.1
PHF1O43189 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.7■□□□□ 0.1
PHF1O43189 AL512604.3-201ENST00000569583 964 ntBASIC15.7■□□□□ 0.1
PHF1O43189 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHF1O43189 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHF1O43189 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PHF1O43189 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHF1O43189 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHF1O43189 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHF1O43189 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.7■□□□□ 0.1
PHF1O43189 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
PHF1O43189 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PHF1O43189 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.7■□□□□ 0.1
PHF1O43189 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHF1O43189 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHF1O43189 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHF1O43189 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHF1O43189 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHF1O43189 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHF1O43189 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PHF1O43189 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.69■□□□□ 0.1
PHF1O43189 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.69■□□□□ 0.1
PHF1O43189 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.69■□□□□ 0.1
PHF1O43189 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.69■□□□□ 0.1
PHF1O43189 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHF1O43189 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.69■□□□□ 0.1
PHF1O43189 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PHF1O43189 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHF1O43189 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PHF1O43189 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHF1O43189 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHF1O43189 AP000593.1-201ENST00000393668 712 ntBASIC15.69■□□□□ 0.1
PHF1O43189 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.69■□□□□ 0.1
PHF1O43189 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.69■□□□□ 0.1
PHF1O43189 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHF1O43189 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PHF1O43189 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PHF1O43189 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.69■□□□□ 0.1
PHF1O43189 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.69■□□□□ 0.1
PHF1O43189 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PHF1O43189 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHF1O43189 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.69■□□□□ 0.1
PHF1O43189 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHF1O43189 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.69■□□□□ 0.1
PHF1O43189 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHF1O43189 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHF1O43189 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PHF1O43189 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHF1O43189 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHF1O43189 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.68■□□□□ 0.1
PHF1O43189 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHF1O43189 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHF1O43189 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHF1O43189 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PHF1O43189 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PHF1O43189 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.68■□□□□ 0.1
PHF1O43189 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHF1O43189 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHF1O43189 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHF1O43189 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.68■□□□□ 0.1
PHF1O43189 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHF1O43189 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHF1O43189 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.68■□□□□ 0.1
PHF1O43189 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PHF1O43189 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.68■□□□□ 0.1
PHF1O43189 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PHF1O43189 RN7SL510P-201ENST00000581311 263 ntBASIC15.68■□□□□ 0.1
PHF1O43189 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.68■□□□□ 0.1
PHF1O43189 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PHF1O43189 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHF1O43189 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PHF1O43189 AC008622.2-201ENST00000617006 1229 ntBASIC15.68■□□□□ 0.1
PHF1O43189 AC023511.2-201ENST00000618803 211 ntBASIC15.68■□□□□ 0.1
PHF1O43189 AL023973.1-201ENST00000624619 620 ntBASIC15.68■□□□□ 0.1
PHF1O43189 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHF1O43189 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHF1O43189 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.68■□□□□ 0.1
PHF1O43189 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.68■□□□□ 0.1
PHF1O43189 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.68■□□□□ 0.1
PHF1O43189 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PHF1O43189 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.68■□□□□ 0.1
PHF1O43189 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHF1O43189 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PHF1O43189 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
PHF1O43189 AP000997.3-201ENST00000623333 2250 ntBASIC15.68■□□□□ 0.1
PHF1O43189 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PHF1O43189 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.68■□□□□ 0.1
PHF1O43189 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PHF1O43189 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
PHF1O43189 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHF1O43189 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHF1O43189 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHF1O43189 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.67■□□□□ 0.1
PHF1O43189 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms