Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PHGDHO43175 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PHGDHO43175 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PHGDHO43175 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PHGDHO43175 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.06■□□□□ 0.48
PHGDHO43175 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PHGDHO43175 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHGDHO43175 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHGDHO43175 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHGDHO43175 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PHGDHO43175 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHGDHO43175 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHGDHO43175 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHGDHO43175 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.06■□□□□ 0.48
PHGDHO43175 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.06■□□□□ 0.48
PHGDHO43175 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.06■□□□□ 0.48
PHGDHO43175 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.06■□□□□ 0.48
PHGDHO43175 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.06■□□□□ 0.48
PHGDHO43175 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PHGDHO43175 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHGDHO43175 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PHGDHO43175 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PHGDHO43175 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PHGDHO43175 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHGDHO43175 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHGDHO43175 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.06■□□□□ 0.48
PHGDHO43175 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PHGDHO43175 KRT8P9-201ENST00000558927 1449 ntBASIC18.06■□□□□ 0.48
PHGDHO43175 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHGDHO43175 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PHGDHO43175 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
PHGDHO43175 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PHGDHO43175 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PHGDHO43175 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PHGDHO43175 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.05■□□□□ 0.48
PHGDHO43175 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PHGDHO43175 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PHGDHO43175 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
PHGDHO43175 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PHGDHO43175 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.05■□□□□ 0.48
PHGDHO43175 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.05■□□□□ 0.48
PHGDHO43175 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PHGDHO43175 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PHGDHO43175 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PHGDHO43175 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.05■□□□□ 0.48
PHGDHO43175 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.05■□□□□ 0.48
PHGDHO43175 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.05■□□□□ 0.48
PHGDHO43175 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PHGDHO43175 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.05■□□□□ 0.48
PHGDHO43175 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PHGDHO43175 CYP2D8P-201ENST00000433633 1490 ntBASIC18.05■□□□□ 0.48
PHGDHO43175 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PHGDHO43175 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PHGDHO43175 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PHGDHO43175 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PHGDHO43175 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PHGDHO43175 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PHGDHO43175 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PHGDHO43175 KRT17P2-201ENST00000300992 1314 ntBASIC18.04■□□□□ 0.48
PHGDHO43175 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PHGDHO43175 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PHGDHO43175 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
PHGDHO43175 TSPY14P-201ENST00000303979 915 ntBASIC18.04■□□□□ 0.48
PHGDHO43175 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PHGDHO43175 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
PHGDHO43175 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PHGDHO43175 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.04■□□□□ 0.48
PHGDHO43175 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PHGDHO43175 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.04■□□□□ 0.48
PHGDHO43175 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.04■□□□□ 0.48
PHGDHO43175 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.04■□□□□ 0.48
PHGDHO43175 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.04■□□□□ 0.48
PHGDHO43175 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.04■□□□□ 0.48
PHGDHO43175 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.04■□□□□ 0.48
PHGDHO43175 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PHGDHO43175 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PHGDHO43175 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PHGDHO43175 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PHGDHO43175 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PHGDHO43175 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PHGDHO43175 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PHGDHO43175 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PHGDHO43175 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PHGDHO43175 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PHGDHO43175 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.04■□□□□ 0.48
PHGDHO43175 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.04■□□□□ 0.48
PHGDHO43175 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PHGDHO43175 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PHGDHO43175 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PHGDHO43175 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PHGDHO43175 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PHGDHO43175 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PHGDHO43175 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PHGDHO43175 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PHGDHO43175 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PHGDHO43175 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PHGDHO43175 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PHGDHO43175 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PHGDHO43175 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.03■□□□□ 0.48
PHGDHO43175 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms