Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TLR4O00206 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TLR4O00206 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.95■□□□□ 0.46
TLR4O00206 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TLR4O00206 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TLR4O00206 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TLR4O00206 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TLR4O00206 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TLR4O00206 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TLR4O00206 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.95■□□□□ 0.46
TLR4O00206 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.95■□□□□ 0.46
TLR4O00206 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.95■□□□□ 0.46
TLR4O00206 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.95■□□□□ 0.46
TLR4O00206 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.95■□□□□ 0.46
TLR4O00206 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.95■□□□□ 0.46
TLR4O00206 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TLR4O00206 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TLR4O00206 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TLR4O00206 AC112777.1-201ENST00000540175 1423 ntBASIC17.95■□□□□ 0.46
TLR4O00206 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TLR4O00206 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TLR4O00206 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.94■□□□□ 0.46
TLR4O00206 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TLR4O00206 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.94■□□□□ 0.46
TLR4O00206 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TLR4O00206 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TLR4O00206 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TLR4O00206 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.94■□□□□ 0.46
TLR4O00206 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TLR4O00206 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
TLR4O00206 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TLR4O00206 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TLR4O00206 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TLR4O00206 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.94■□□□□ 0.46
TLR4O00206 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TLR4O00206 AC096582.2-201ENST00000510860 516 ntBASIC17.94■□□□□ 0.46
TLR4O00206 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.94■□□□□ 0.46
TLR4O00206 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TLR4O00206 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
TLR4O00206 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.94■□□□□ 0.46
TLR4O00206 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.94■□□□□ 0.46
TLR4O00206 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TLR4O00206 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TLR4O00206 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.94■□□□□ 0.46
TLR4O00206 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TLR4O00206 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TLR4O00206 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TLR4O00206 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TLR4O00206 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TLR4O00206 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.94■□□□□ 0.46
TLR4O00206 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TLR4O00206 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.94■□□□□ 0.46
TLR4O00206 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.94■□□□□ 0.46
TLR4O00206 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TLR4O00206 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TLR4O00206 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
TLR4O00206 AC099343.3-201ENST00000605834 2503 ntBASIC17.94■□□□□ 0.46
TLR4O00206 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TLR4O00206 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TLR4O00206 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TLR4O00206 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.93■□□□□ 0.46
TLR4O00206 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TLR4O00206 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TLR4O00206 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TLR4O00206 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TLR4O00206 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TLR4O00206 SDHAP2-201ENST00000455183 2001 ntBASIC17.93■□□□□ 0.46
TLR4O00206 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TLR4O00206 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TLR4O00206 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TLR4O00206 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.93■□□□□ 0.46
TLR4O00206 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.93■□□□□ 0.46
TLR4O00206 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TLR4O00206 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.93■□□□□ 0.46
TLR4O00206 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.93■□□□□ 0.46
TLR4O00206 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TLR4O00206 AC114341.1-201ENST00000618070 349 ntBASIC17.93■□□□□ 0.46
TLR4O00206 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TLR4O00206 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TLR4O00206 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TLR4O00206 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TLR4O00206 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TLR4O00206 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TLR4O00206 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
TLR4O00206 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TLR4O00206 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TLR4O00206 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.93■□□□□ 0.46
TLR4O00206 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TLR4O00206 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.92■□□□□ 0.46
TLR4O00206 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.92■□□□□ 0.46
TLR4O00206 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TLR4O00206 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TLR4O00206 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TLR4O00206 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.92■□□□□ 0.46
TLR4O00206 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TLR4O00206 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TLR4O00206 AC068472.1-201ENST00000474589 881 ntBASIC17.92■□□□□ 0.46
TLR4O00206 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.92■□□□□ 0.46
TLR4O00206 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.92■□□□□ 0.46
TLR4O00206 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms